The Complete Mitochondrial Genome of the Mashen Pig (Sus scrofa)

Guo, C., A brief review of 30 years of research on the characteristics and utilization of Mashen pigs, Pig Sci., 2008, vol. 160, no. 10, pp. 104—105.

Google Scholar 

China National Commission of Animal Genetic Resources, Animal Genetic Resources in China Pigs, Beijing: China Agriculture Press, 2011.

Google Scholar 

Li, M., Zhang, N., Zhang, W., et al., Comprehensive analysis of differentially expressed circRNAs and ceRNA regulatory network in porcine skeletal muscle, BMC Genomics, 2021, vol. 22, p. 320. https://doi.org/10.1186/s12864-021-07645-8

Article  CAS  PubMed  PubMed Central  Google Scholar 

Gao, P., Cheng, Z., Li, M., et al., Selection of candidate genes affecting meat quality and preliminary exploration of related molecular mechanisms in the Mashen pig, Asian-Australas. J. Anim. Sci., 2019, vol. 32, no. 8, pp. 1084—1094. https://doi.org/10.5713/ajas.18.0718

Article  CAS  PubMed  PubMed Central  Google Scholar 

Cai, C., Li, M., Zhang, Y., et al., Comparative transcriptome analyses of longissimus thoracis between pig breeds differing in muscle characteristics, Front. Genet., 2020, vol. 11. https://doi.org/10.3389/fgene.2020.526309

Zhao, J., Li, K., Yang, Q., et al., Enhanced adipogenesis in Mashen pigs compared with Large White pigs, Ital. J. Anim. Sci., 2017, vol. 16, no. 2, pp. 217—225. https://doi.org/10.1080/1828051X.2017.1285682

Article  Google Scholar 

Xiang, H., Gao, J., Yu, B., et al., Early Holocene chicken domestication in northern China, Proc. Natl. Acad. Sci. U.S.A., 2014, vol. 111, no. 49, pp. 17564—17569. https://doi.org/10.1073/pnas.1411882111

Article  CAS  PubMed  PubMed Central  Google Scholar 

Liu, H., Wang, J., Wang, D., et al., Cybrid model supports mitochondrial genetic effect on pig litter size, Front. Genet., 2020, vol. 11. https://doi.org/10.3389/fgene.2020.579382

Tsai, T.S., Rajasekar, S., and St. John, J.C., The relationship between mitochondrial DNA haplotype and the reproductive capacity of domestic pigs (Sus scrofa domesticus), BMC Genet., 2016, vol. 17, p. 67. https://doi.org/10.1186/s12863-016-0375-4

Article  CAS  PubMed  PubMed Central  Google Scholar 

Bolger, A.M., Lohse, M., Usadel, B., Trimmomatic: a flexible trimmer for Illumina sequence data, Bioinformatics, 2014, vol. 30, no. 15, pp. 2114—2120. https://doi.org/10.1093/bioinformatics/btu170

Article  CAS  PubMed  PubMed Central  Google Scholar 

Jin, J., Yu, W., Yang, J., et al., GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes, Genome Biol., 2020, vol. 21, p. 241. https://doi.org/10.1186/s13059-020-02154-5

Article  PubMed  PubMed Central  Google Scholar 

Tamura, K., Stecher, G., and Kumar, S., MEGA11: molecular evolutionary genetics analysis version 11, Mol. Biol. Evol., 2021, vol. 38, no. 7, pp. 3022—3027. https://doi.org/10.1093/molbev/msab120

Article  CAS  PubMed  PubMed Central  Google Scholar 

Guo, C., Chen, B., Xie, W., et al., Studies on the breed characteristics of Mashen Pigs, Proceedings of the 7th World Congress on Genetics Applied to Livestock Production, Montpellier: Institut National de la Recherche Agronomique (INRA), 2002, vol. 3, pp. 1—4.

Guo, Y., Liu, T., Li, W., et al., Effects of low-ambient-temperature stimulation on modifying the intestinal structure and function of different pig breeds, Animals, 2022, vol. 12, no. 20, pp. 2740—2755. https://doi.org/10.3390/ani12202740

Article  PubMed  PubMed Central  Google Scholar 

Ballard, J.W.O. and Pichaud, N., Mitochondrial DNA: more than an evolutionary bystander, Funct. Ecol., 2013, vol. 28, no. 1, pp. 218—231. https://doi.org/10.1111/1365-2435.12177

Article  Google Scholar 

Zhang, J., Liu, H., Luo, A., et al., Molecular adaptability of seasonal high-low temperature in pigs, Acta Vet. Zootechn. Sin., 2018, vol. 49, no. 4, pp. 693—700.

Google Scholar 

Giuffra, E., Kijas, J.M., Amarger, V., et al., The origin of the domestic pig: independent domestication and subsequent introgression, Genetics, 2000, vol. 154, no. 4, pp. 1785—1791. https://doi.org/10.1093/genetics/154.4.1785

Article  CAS  PubMed  PubMed Central  Google Scholar 

Kim, K.I., Lee, J.H., Li, K., et al., Phylogenetic relationships of Asian and European pig breeds determined by mitochondrial DNA D-loop sequence polymorphism, Anim. Genet., 2002, vol. 33, no. 1, pp. 19—25. https://doi.org/10.1046/j.1365-2052.2002.00784.x

Article  CAS  PubMed  Google Scholar 

Yang, S., Wang, Z., Liu, B., et al., Genetic variation and relationships of eighteen Chinese indigenous pig breeds, Genet. Sel. Evol., 2003, vol. 35, pp. 657—671. https://doi.org/10.1186/1297-9686-35-7-657

Article  CAS  PubMed  PubMed Central  Google Scholar 

Li, X., Study on the polymorphism of mtDNA D-loop sequences in Shanxi Mashen pig and eight reference populations, Anim. Husb. Vet. Med., 2015, vol. 47, no. 2, pp. 51—54.

Google Scholar 

Peng, Y., Derks, M.F., Groenen, M.A., et al., Distinct traces of mixed ancestry in western commercial pig genomes following gene flow from Chinese indigenous breeds, Front. Genet., 2023, vol. 13. https://doi.org/10.3389/fgene.2022.1070783

Comments (0)

No login
gif