Abais-Battad JM, Saravia FL, Lund H, Dasinger JH, Fehrenbach DJ, Alsheikh AJ, Zemaj J, Kirby JR, Mattson DL (2021) Dietary influences on the Dahl SS rat gut microbiota and its effects on salt-sensitive hypertension and renal damage. Acta Physiol (oxf) 232:e13662. https://doi.org/10.1111/apha.13662

Article  CAS  PubMed  Google Scholar 

Andrianova NV, Popkov VA, Klimenko NS, Tyakht AV, Baydakova GV, Frolova OY, Zorova LD, Pevzner IB, Zorov DB, Plotnikov EY (2020) Microbiome-metabolome signature of acute kidney injury. Metabolites 10:142. https://doi.org/10.3390/metabo10040142

Article  CAS  PubMed  PubMed Central  Google Scholar 

Bellini MI, Nozdrin M, Pengel L, Knight S, Papalois V (2022) How good is a living donor? Systematic review and meta-analysis of the effect of donor demographics on post kidney transplant outcomes. J Nephrol 35:807–820. https://doi.org/10.1007/s40620-021-01231-7

Article  PubMed  PubMed Central  Google Scholar 

Belstrøm D (2020) The salivary microbiota in health and disease. J Oral Microbiol 12:1723975. https://doi.org/10.1080/20002297.2020.1723975

Article  CAS  PubMed  PubMed Central  Google Scholar 

Belstrøm D, Eiberg JM, Enevold C, Grande MA, Jensen CAJ, Skov L, Hansen PR (2020) Salivary microbiota and inflammation-related proteins in patients with psoriasis. Oral Dis 26:677–687. https://doi.org/10.1111/odi.13277

Article  PubMed  PubMed Central  Google Scholar 

Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, Alexander H, Alm EJ, Arumugam M, Asnicar F, Bai Y, Bisanz JE, Bittinger K, Brejnrod A, Brislawn CJ, Brown CT, Callahan BJ, Caraballo-Rodríguez AM, Chase J, Cope EK, Da Silva R, Diener C, Dorrestein PC, Douglas GM, Durall DM, Duvallet C, Edwardson CF, Ernst M, Estaki M, Fouquier J, Gauglitz JM, Gibbons SM, Gibson DL, Gonzalez A, Gorlick K, Guo J, Hillmann B, Holmes S, Holste H, Huttenhower C, Huttley GA, Janssen S, Jarmusch AK, Jiang L, Kaehler BD, Kang KB, Keefe CR, Keim P, Kelley ST, Knights D, Koester I, Kosciolek T, Kreps J, Langille MGI, Lee J, Ley R, Liu YX, Loftfield E, Lozupone C, Maher M, Marotz C, Martin BD, McDonald D, McIver LJ, Melnik AV, Metcalf JL, Morgan SC, Morton JT, Naimey AT, Navas-Molina JA, Nothias LF, Orchanian SB, Pearson T, Peoples SL, Petras D, Preuss ML, Pruesse E, Rasmussen LB, Rivers A, Robeson MS 2nd, Rosenthal P, Segata N, Shaffer M, Shiffer A, Sinha R, Song SJ, Spear JR, Swafford AD, Thompson LR, Torres PJ, Trinh P, Tripathi A, Turnbaugh PJ, Ul-Hasan S, van der Hooft JJJ, Vargas F, Vázquez-Baeza Y, Vogtmann E, von Hippel M, Walters W, Wan Y, Wang M, Warren J, Weber KC, Williamson CHD, Willis AD, Xu ZZ, Zaneveld JR, Zhang Y, Zhu Q, Knight R, Caporaso JG (2019) Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nat Biotechnol 37:852–857. https://doi.org/10.1038/s41587-019-0209-9

Article  CAS  PubMed  PubMed Central  Google Scholar 

Boom H, Mallat MJ, de Fijter JW, Zwinderman AH, Paul LC (2001) Delayed graft function influences renal function but not survival. Transplant Proc 33:1291. https://doi.org/10.1016/s0041-1345(00)02482-9

Article  CAS  PubMed  Google Scholar 

Chen BY, Lin WZ, Li YL, Bi C, Du LJ, Liu Y, Zhou LJ, Liu T, Xu S, Shi CJ, Zhu H, Wang YL, Sun JY, Liu Y, Zhang WC, Lu HX, Wang YH, Feng Q, Chen FX, Wang CQ, Tonetti MS, Zhu YQ, Zhang H, Duan SZ (2023) Roles of oral microbiota and oral-gut microbial transmission in hypertension. J Adv Res 43:147–161. https://doi.org/10.1016/j.jare.2022.03.007

Article  CAS  PubMed  Google Scholar 

Chen C, You LJ, Huang Q, Fu X, Zhang B, Liu RH, Li C (2018) Modulation of gut microbiota by mulberry fruit polysaccharide treatment of obese diabetic db/db mice. Food Funct 9:3732–3742. https://doi.org/10.1039/c7fo01346a

Article  CAS  PubMed  Google Scholar 

Chen R, Wang J, Zhan R, Zhang L, Wang X (2019) Fecal metabonomics combined with 16S rRNA gene sequencing to analyze the changes of gut microbiota in rats with kidney-yang deficiency syndrome and the intervention effect of You-gui pill. J Ethnopharmacol 244:112139. https://doi.org/10.1016/j.jep.2019.112139

Article  CAS  PubMed  Google Scholar 

Duan X, Chen X, Gupta M, Seriwatanachai D, Xue H, Xiong Q, Xu T, Li D, Mo A, Tang X, Zhou X, Li Y, Yuan Q (2020) Salivary microbiome in patients undergoing hemodialysis and its associations with the duration of the dialysis. BMC Nephrol 21:414. https://doi.org/10.1186/s12882-020-02009-y

Article  CAS  PubMed  PubMed Central  Google Scholar 

Geddes CC, Woo YM, Jardine AG (2002) The impact of delayed graft function on the long-term outcome of renal transplantation. J Nephrol 15:17–21

PubMed  Google Scholar 

Gonçalves LF, Fermiano D, Feres M, Figueiredo LC, Teles FR, Mayer MP, Faveri M (2012) Levels of Selenomonas species in generalized aggressive periodontitis. J Periodontal Res 47:711–718. https://doi.org/10.1111/j.1600-0765.2012.01485.x

Article  CAS  PubMed  PubMed Central  Google Scholar 

Gross EL, Leys EJ, Gasparovich SR, Firestone ND, Schwartzbaum JA, Janies DA, Asnani K, Griffen AL (2010) Bacterial 16S sequence analysis of severe caries in young permanent teeth. J Clin Microbiol 48:4121–4128. https://doi.org/10.1128/jcm.01232-10

Article  PubMed  PubMed Central  Google Scholar 

Gryp T, De Paepe K, Vanholder R, Kerckhof FM, Van Biesen W, Van de Wiele T, Verbeke F, Speeckaert M, Joossens M, Couttenye MM, Vaneechoutte M, Glorieux G (2020) Gut microbiota generation of protein-bound uremic toxins and related metabolites is not altered at different stages of chronic kidney disease. Kidney Int 97:1230–1242. https://doi.org/10.1016/j.kint.2020.01.028

Article  CAS  PubMed  Google Scholar 

Hawkes CG, Hinson AN, Vashishta A, Read CB, Carlyon JA, Lamont RJ, Uriarte SM, Miller DP (2023) Selenomonas sputigena interactions with gingival epithelial cells that promote inflammation. Infect Immun 91:e0031922. https://doi.org/10.1128/iai.00319-22

Article  CAS  PubMed  Google Scholar 

He H, Xu H, Xu J, Zhao H, Lin Q, Zhou Y, Nie Y (2020) Sodium butyrate ameliorates gut microbiota dysbiosis in lupus-like mice. Front Nutr 7:604283. https://doi.org/10.3389/fnut.2020.604283

Article  CAS  PubMed  PubMed Central  Google Scholar 

Hu J, Iragavarapu S, Nadkarni GN, Huang R, Erazo M, Bao X, Verghese D, Coca S, Ahmed MK, Peter I (2018) Location-specific oral microbiome possesses features associated with CKD. Kidney Int Rep 3:193–204. https://doi.org/10.1016/j.ekir.2017.08.018

Article  PubMed  Google Scholar 

Hu Y, Cheng M, Liu B, Dong J, Sun L, Yang J, Yang F, Chen X, Jin Q (2020) Metagenomic analysis of the lung microbiome in pulmonary tuberculosis - a pilot study. Emerg Microbes Infect 9:1444–1452. https://doi.org/10.1080/22221751.2020.1783188

Article  CAS  PubMed  PubMed Central  Google Scholar 

Huang J, Millis JM, Mao Y, Millis MA, Sang X, Zhong S (2015) Voluntary organ donation system adapted to Chinese cultural values and social reality. Liver Transpl 21:419–422. https://doi.org/10.1002/lt.24069

Article  PubMed  Google Scholar 

Kelly JR, Borre Y, Obrien C, Patterson E, El Aidy S, Deane J, Kennedy PJ, Beers S, Scott K, Moloney G, Hoban AE, Scott L, Fitzgerald P, Ross P, Stanton C, Clarke G, Cryan JF, Dinan TG (2016) Transferring the blues: depression-associated gut microbiota induces neurobehavioural changes in the rat. J Psychiatr Res 82:109–118. https://doi.org/10.1016/j.jpsychires.2016.07.019

Article  PubMed  Google Scholar 

Khasnobish A, Takayasu L, Watanabe KI, Nguyen TTT, Arakawa K, Hotta O, Joh K, Nakano A, Hosomi S, Hattori M, Suda W, Morita H (2021) Dysbiosis in the salivary microbiome associated with IgA nephropathy-‍A‍ ‍Japanese cohort study. Microbes Environ 36:2. https://doi.org/10.1264/jsme2.ME21006

Article  Google Scholar 

Kim JE, Kim HE, Park JI, Cho H, Kwak MJ, Kim BY, Yang SH, Lee JP, Kim DK, Joo KW, Kim YS, Kim BS, Lee H (2020) The association between gut microbiota and uremia of chronic kidney disease. Microorganisms 8:907. https://doi.org/10.3390/microorganisms8060907

Article  CAS  PubMed  PubMed Central  Google Scholar 

Kim YC, Choi S, Sohn KH, Bang JY, Kim Y, Jung JW, Kim HY, Park J, Kim K, Kang MG, Yang MS, Kim S, Kim SH, Choi JH, Park HJ, Lee SM, Kim SH, Park JW, Lee JM, Cho SH, Won S, Yi H, Kang HR (2022) Selenomonas: a marker of asthma severity with the potential therapeutic effect. Allergy 77:317–320. https://doi.org/10.1111/all.15114

Article  PubMed  Google Scholar 

Kuhn M (2008) Building predictive models in R using the caret package. J Stat Software 28:1–26. https://doi.org/10.18637/jss.v028.i05

Article