Scheffers, B. R. et al. The broad footprint of climate change from genes to biomes to people. Science 354, aaf7671 (2016).

Article  PubMed  Google Scholar 

Ceballos, G., Ehrlich, P. R. & Raven, P. H. Vertebrates on the brink as indicators of biological annihilation and the sixth mass extinction. Proc. Natl Acad. Sci. USA 117, 13596–13602 (2020).

Article  CAS  PubMed  PubMed Central  Google Scholar 

Ceballos, G., Ehrlich, P. R. & Dirzo, R. Biological annihilation via the ongoing sixth mass extinction signaled by vertebrate population losses and declines. Proc. Natl Acad. Sci. USA 114, E6089–E6096 (2017).

Article  CAS  PubMed  PubMed Central  Google Scholar 

Sánchez-Bayo, F. & Wyckhuys, K. A. Worldwide decline of the entomofauna: a review of its drivers. Biol. Conserv. 232, 8–27 (2019).

Article  Google Scholar 

Sánchez‐Bayo, F. & Wyckhuys, K. A. Further evidence for a global decline of the entomofauna. Aust. Entomol. 60, 9–26 (2021).

Article  Google Scholar 

Gitay, H. et al. Climate change and biological diversity. IPCC-XVIII Doc 4 (f) (14.VIII.2001). Intergovernmental Panel on Climate Change: Geneva, Switzerland. https://www.ipcc.ch/site/assets/uploads/2001/09/doc4f.pdf (2001).

International Human Genome Sequencing Consortium. Finishing the euchromatic sequence of the human genome. Nature 431, 931–945 (2004).

Article  Google Scholar 

Khoury, M. J. et al. The continuum of translation research in genomic medicine: how can we accelerate the appropriate integration of human genome discoveries into health care and disease prevention? Genet. Med. 9, 665–674 (2007).

Article  PubMed  Google Scholar 

Manolio, T. A. et al. Implementing genomic medicine in the clinic: the future is here. Genet. Med. 15, 258–267 (2013).

Article  PubMed  PubMed Central  Google Scholar 

Roberts, M. C. et al. Advancing precision public health using human genomics: examples from the field and future research opportunities. Genome Med. 13, 10 (2021).

Article  Google Scholar 

Giani, A. M., Gallo, G. R., Gianfranceschi, L. & Formenti, G. Long walk to genomics: history and current approaches to genome sequencing and assembly. Comput. Struct. Biotechnol. J. 18, 9–19 (2020).

Article  CAS  PubMed  Google Scholar 

Lewin, H. A. et al. The Earth BioGenome Project 2020: starting the clock. Proc. Natl Acad. Sci. USA 119, e2115635118 (2022).

Article  CAS  PubMed  PubMed Central  Google Scholar 

McMahon, B. J., Teeling, E. C. & Höglund, J. How and why should we implement genomics into conservation? Evol. Appl. 7, 999–1007 (2014).

Article  PubMed  PubMed Central  Google Scholar 

Frankham, R., Ballou, J. D. & Briscoe, D. A. Introduction to Conservation Genetics 2nd edn (Cambridge Univ. Press, 2010).

Fuentes‐Pardo, A. P. & Ruzzante, D. E. Whole‐genome sequencing approaches for conservation biology: advantages, limitations and practical recommendations. Mol. Ecol. 26, 5369–5406 (2017).

Article  PubMed  Google Scholar 

Supple, M. A. & Shapiro, B. Conservation of biodiversity in the genomics era. Genome Biol. 19, 131 (2018).

Article  PubMed  PubMed Central  Google Scholar 

Hohenlohe, P. A., Funk, W. C. & Rajora, O. P. Population genomics for wildlife conservation and management. Mol. Ecol. 30, 62–82 (2021).

Article  PubMed  Google Scholar 

Allendorf, F. W., Hohenlohe, P. A. & Luikart, G. Genomics and the future of conservation genetics. Nat. Rev. Genet. 11, 697–709 (2010).

Article  CAS  PubMed  Google Scholar 

Lewin, H. A. et al. Earth BioGenome Project: sequencing life for the future of life. Proc. Natl Acad. Sci. USA 115, 4325–4333 (2018).

Article  CAS  PubMed  PubMed Central  Google Scholar 

Taylor, H. R., Dussex, N. & van Heezik, Y. Bridging the conservation genetics gap by identifying barriers to implementation for conservation practitioners. Glob. Ecol. Conserv. 10, 231–242 (2017).

Google Scholar 

Jarvis, R. M. et al. Navigating spaces between conservation research and practice: are we making progress? Ecol. Solut. Evid. 1, e12028 (2020).

Article  Google Scholar 

Kadykalo, A. N., Cooke, S. J. & Young, N. Conservation genomics from a practitioner lens: evaluating the research-implementation gap in a managed freshwater fishery. Biol. Conserv. 241, 108350 (2020).

Article  Google Scholar 

Toomey, A. H., Knight, A. T. & Barlow, J. Navigating the space between research and implementation in conservation. Conserv. Lett. 10, 619–625 (2017).

Article  Google Scholar 

Hogg, C. J. et al. Threatened species initiative: empowering conservation action using genomic resources. Proc. Natl Acad. Sci. USA 119, e2115643118 (2022).

Article  PubMed  PubMed Central  Google Scholar 

Rossetto, M. et al. A conservation genomics workflow to guide practical management actions. Glob. Ecol. Conserv. 26, e01492 (2021).

Google Scholar 

Kershaw, F. et al. The coalition for conservation genetics: working across organizations to build capacity and achieve change in policy and practice. Conserv. Sci. Pract. 4, e12635 (2022).

Article  Google Scholar 

Holderegger, R. et al. Conservation genetics: linking science with practice. Mol. Ecol. 28, 3848–3856 (2019).

Article  PubMed  Google Scholar 

O’Brien, D. et al. Bringing together approaches to reporting on within species genetic diversity. J. Appl. Ecol. 59, 2227–2233 (2022).

Article  Google Scholar 

UN Environment Programme. Kunming-Montreal Global Biodiversity Framework — CBD/COP/15/L25. UN Convention on Biological Diversity: Montreal, Canada. https://www.cbd.int/doc/c/e6d3/cd1d/daf663719a03902a9b116c34/cop-15-l-25-en.pdf (2022).

vonHoldt, B. M., Brzeski, K. E., Wilcove, D. S. & Rutledge, L. Y. Redefining the role of admixture and genomics in species conservation. Conserv. Lett. 11, e12371 (2018).

Article  Google Scholar 

Flanagan, S. P., Forester, B. R., Latch, E. K., Aitken, S. N. & Hoban, S. Guidelines for planning genomic assessment and monitoring of locally adaptive variation to inform species conservation. Evol. Appl. 11, 1035–1052 (2018).

Article  PubMed  Google Scholar 

Brandies, P., Peel, E., Hogg, C. J. & Belov, K. The value of reference genomes in the conservation of threatened species. Genes 10, 846 (2019).

Article  CAS  PubMed  PubMed Central  Google Scholar 

Guhlin, J. et al. Species-wide genomics of kākāpō provides transformational tools to accelerate recovery. Nat. Ecol. Evol. 7, 1693–1705 (2023).

Article  PubMed  Google Scholar 

Funk, W., Forester, B. R., Converse, S. J., Darst, C. & Morey, S. Improving conservation policy with genomics: a guide to integrating adaptive potential into US Endangered Species Act decisions for conservation practitioners and geneticists. Conserv. Genet. 20, 115–134 (2019).

Article  Google Scholar 

Matzek, V., Covino, J., Funk, J. L. & Saunders, M. Closing the knowing-doing gap in invasive plant management: accessibility and interdisciplinarity of scientific research. Conserv. Lett. 7, 208–215 (2014).

Article  Google Scholar 

De León, L. F., Silva, B., Avilés-Rodríguez, K. J. & Buitrago-Rosas, D. Harnessing the omics revolution to address the global biodiversity crisis. Curr. Opin. Biotechnol. 80, 102901 (2023).

Article  PubMed  Google Scholar 

Tang, H. Disentangling a polyploid genome. Nat. Plants 3, 688–689 (2017).

Article  PubMed  Google Scholar 

Jaron, K. S. et al. Convergent consequences of parthenogenesis on stick insect genomes. Sci. Adv. 8, eabg3842 (2022).

Article  CAS  PubMed  PubMed Central  Google Scholar 

Liehr, T. in Cytogenomics (ed. Liehr, T.) 1–7 (Academic, 2021).

Fleischmann, A. et al. Evolution of genome size and chromosome number in the carnivorous plant genus Genlisea (Lentibulariaceae), with a new estimate of the minimum genome size in angiosperms. Ann. Bot. 114, 1651–1663 (2014).

Article  CAS  PubMed  PubMed Central  Google Scholar 

Shao, C. et al. The enormous repetitive Antarctic krill genome reveals environmental adaptations and population insights. Cell 186, 1279–94.e19 (2023).

Article  CAS  PubMed  Google Scholar 

Peel, E. et al. Best genome sequencing strategies for annotation of complex immune gene families in wildlife. GigaScience 11, giac100 (2022).

Article  PubMed  PubMed Central  Google Scholar 

Zhang, G. Bird sequencing project takes off. Nature 522, 34 (2015).

Article  CAS  PubMed  Google Scholar 

Teeling, E. C. et al. Bat biology, genomes, and the Bat1K project: to generate chromosome-level genomes for all living bat species. Annu. Rev. Anim. Biosci. 6, 23–46 (2018).

Article  PubMed  Google Scholar 

Haussler, D. et al. Genome 10K: a proposal to obtain whole-genome sequence for 10000 vertebrate species. J. Hered. 100, 659–674 (2009).

Article  Google Scholar 

Rhie, A. et al. Towards complete and error-free genome assemblies of all vertebrate species. Nature 592, 737–746 (2021).

Article  CAS  PubMed