Mayr E. Animal species and evolution. Belknap: Cambridge, MA); 1963.
Antonovics J. Toward community genomics? Ecology. 2003;84(3):598–601.
Antonovics J. The input from population genetics: “The new ecological genetics.” Syst Bot. 1976;1(3):233–45.
Vellend M. Conceptual synthesis in community ecology. Q Rev Biol. 2010;85(2):183–206.
Vellend M. Species diversity and genetic diversity: Parallel processes and correlated patterns. Am Nat. 2005;166(2):199–215.
Vellend M, Geber MA. Connections between species diversity and genetic diversity. Ecol Lett. 2005;8(7):767–81.
Ware IM, Fitzpatrick CR, Senthilnathan A, Bayliss SLJ, Beals KK, Mueller LO, et al. Feedbacks link ecosystem ecology and evolution across spatial and temporal scales: Empirical evidence and future directions. Funct Ecol. 2019;33(1):31–42.
Bailey JK, Hendry AP, Kinnison MT, Post DM, Palkovacs EP, Pelletier F, et al. From genes to ecosystems: an emerging synthesis of eco-evolutionary dynamics. New Phytol. 2009;184(4):746–9.
Des Roches S, Post DM, Turley NE, Bailey JK, Hendry AP, Kinnison MT, et al. The ecological importance of intraspecific variation. Nat Ecol Evol. 2018;2(1):57–64.
Whitham TG, Bailey JK, Schweitzer JA, Shuster SM, Bangert RK, Leroy CJ, et al. A framework for community and ecosystem genetics: from genes to ecosystems. Nat Rev Genet. 2006;7(7):510–23.
Article CAS PubMed Google Scholar
Pelletier F, Garant D, Hendry AP. Eco-evolutionary dynamics. Philos Trans Royal Soc B Biol Sci. 2009;364(1523):1483–9.
Wright S. Isolation by distance. Genetics. 1943;28(2):114.
Article CAS PubMed PubMed Central Google Scholar
Wright S. Evolution in Mendelian Populations. Genetics. 1931;16(2):97–159.
Article CAS PubMed PubMed Central Google Scholar
Ellegren H, Galtier N. Determinants of genetic diversity. Nat Rev Genet. 2016;17(7):422–33.
Article CAS PubMed Google Scholar
Hamilton MB. Population genetics: Wiley; 2021.
Blum MJ, Bagley MJ, Walters DM, Jackson SA, Daniel FB, Chaloud DJ, et al. Genetic diversity and species diversity of stream fishes covary across a land-use gradient. Oecologia. 2012;168(1):83–95.
Messmer V, Jones GP, Munday PL, Planes S. Concordance between genetic and species diversity in coral reef fishes across the Pacific Ocean biodiversity gradient. Evolution. 2012;66(12):3902–17.
Manel S, Guerin PE, Mouillot D, Blanchet S, Velez L, Albouy C, et al. Global determinants of freshwater and marine fish genetic diversity. Nat Commun. 2020;11(692).
Schmidt C, Dray S, Garroway CJ. Genetic and species-level biodiversity patterns are linked by demography and ecological opportunity. Evolution. 2022;76(1):86–100.
Taberlet P, Zimmermann NE, Englisch T, Tribsch A, Holderegger R, Alvarez N, et al. Genetic diversity in widespread species is not congruent with species richness in alpine plant communities. Ecol Lett. 2012;15(12):1439–48.
Wright S. The genetical structure of populations. Ann Eugen. 1949;15(1):323–54.
Darwin C. On the origin of species by means of natural selection, or, the preservation of favoured races in the struggle for life. London: John Murray; 1859.
Jørgensen SE, Fath B. Encyclopedia of ecology: Newnes; 2014.
Wolf JBW, Lindell J, Backström N. Speciation genetics: current status and evolving approaches. Philos Trans Royal Soc B Biol Sci. 2010;365(1547):1717–33.
Gotelli NJ, Anderson MJ, Arita HT, Chao A, Colwell RK, Connolly SR, et al. Patterns and causes of species richness: a general simulation model for macroecology. Ecol Lett. 2009;12(9):873–86.
Leprieur F, Colosio S, Descombes P, Parravicini V, Kulbicki M, Cowman PF, et al. Historical and contemporary determinants of global phylogenetic structure in tropical reef fish faunas. Ecography. 2016;39(9):825–35.
Hagen O. Coupling eco-evolutionary mechanisms with deep-time environmental dynamics to understand biodiversity patterns. Ecography. 2023:e06132.
Pilowsky JA, Colwell RK, Rahbek C, Fordham DA. Process-explicit models reveal the structure and dynamics of biodiversity patterns. Sci Adv. 2022;8(31):eabj2271.
Pellissier L, Leprieur F, Parravicini V, Cowman PF, Kulbicki M, Litsios G, et al. Quaternary coral reef refugia preserved fish diversity. Science. 2014;344(6187):1016.
Article CAS PubMed Google Scholar
Descombes P, Gaboriau T, Albouy C, Heine C, Leprieur F, Pellissier L. Linking species diversification to palaeo-environmental changes: A process-based modelling approach. Glob Ecol Biogeogr. 2018;27(2):233–44.
Gaboriau T, Albouy C, Descombes P, Mouillot D, Pellissier L, Leprieur F. Ecological constraints coupled with deep-time habitat dynamics predict the latitudinal diversity gradient in reef fishes. Proc R Soc B-Biol Sci. 1911;2019(286):10.
Hagen O, Fluck B, Fopp F, Cabral JS, Hartig F, Pontarp M, et al. gen3sis: A general engine for eco-evolutionary simulations of the processes that shape Earth’s biodiversity. PLoS Biol. 2021;19(7):31.
Warren BH, Simberloff D, Ricklefs RE, Aguilee R, Condamine FL, Gravel D, et al. Islands as model systems in ecology and evolution: prospects fifty years after MacArthur-Wilson. Ecol Lett. 2015;18(2):200–17.
Parravicini V, Bender MG, Villéger S, Leprieur F, Pellissier L, Donati FGA, et al. Coral reef fishes reveal strong divergence in the prevalence of traits along the global diversity gradient. Proc Royal Soc B Biol Sci. 1961;2021(288):20211712.
Cowman PF, Bellwood DR. Coral reefs as drivers of cladogenesis: expanding coral reefs, cryptic extinction events, and the development of biodiversity hotspots. J Evol Biol. 2011;24(12):2543–62.
Article CAS PubMed Google Scholar
Renema W, Bellwood DR, Braga JC, Bromfield K, Hall R, Johnson KG, et al. Hopping hotspots: Global shifts in marine Biodiversity. Science. 2008;321(5889):654–7.
Article CAS PubMed Google Scholar
Rabosky DL, Chang J, Title PO, Cowman PF, Sallan L, Friedman M, et al. An inverse latitudinal gradient in speciation rate for marine fishes. Nature. 2018;559(7714):392–5.
Article CAS PubMed Google Scholar
Hillebrand H. Strength, slope and variability of marine latitudinal gradients. Mar Ecol Prog Ser. 2004;273:251–68.
Kinlock NL, Prowant L, Herstoff EM, Foley CM, Akin-Fajiye M, Bender N, et al. Explaining global variation in the latitudinal diversity gradient: Meta-analysis confirms known patterns and uncovers new ones. Glob Ecol Biogeogr. 2018;27(1):125–41.
Mora C, editor. Ecology of fishes on coral reefs. Cambridge: Cambridge University Press; 2015. p. 64–75.
Vilcot M, Albouy C, Donati GFA, Claverie T, Julius P, Manel S, et al. Spatial genetic differentiation correlates with species assemblage turnover across tropical reef fish lineages. Glob Ecol Biogeogr. 2023;32:535–47.
Mason NWH, Mouillot D, Lee WG, Wilson JB. Functional richness, functional evenness and functional divergence: the primary components of functional diversity. Oikos. 2005;111(1):112–8.
Mouillot D, Mason WHN, Dumay O, Wilson JB. Functional regularity: a neglected aspect of functional diversity. Oecologia. 2005;142(3):353–9.
Pfeiffer VW, Ford BM, Housset J, McCombs A, Blanco-Pastor JL, Gouin N, et al. Partitioning genetic and species diversity refines our understanding of species-genetic diversity relationships. Ecol Evol. 2018;8(24):12351–64.
Article PubMed PubMed Central Google Scholar
Reisch C, Schmid C. Species and genetic diversity are not congruent in fragmented dry grasslands. Ecol Evol. 2019;9(1):664–71.
Reisch C, Hartig F. Species and genetic diversity patterns show different responses to land use intensity in central European grasslands. Divers Distrib. 2021;27(3):392–401.
Kahilainen A, Puurtinen M, Kotiaho JS. Conservation implications of species-genetic diversity correlations. Glob Ecol Conserv. 2014;2:315–23.
Feder JL, Egan SP, Nosil P. The genomics of speciation-with-gene-flow. Trends Genet. 2012;28(7):342–50.
Article CAS PubMed Google Scholar
Seehausen O, Butlin RK, Keller I, Wagner CE, Boughman JW, Hohenlohe PA, et al. Genomics and the origin of species. Nat Rev Genet. 2014;15(3):176–92.
Article CAS PubMed Google Scholar
Ravinet M, Faria R, Butlin RK, Galindo J, Bierne N, Rafajlovic M, et al. Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow. J Evol Biol. 2017;30(8):1450–77.
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