QTL analysis of sorghum grain traits based on high-density genetic map

Baye W, Xie Q, Xie P (2022) Genetic architecture of grain yield-related traits in sorghum and maize. Int J Mol Sci 23:2405

Article  PubMed  PubMed Central  Google Scholar 

Boyles RE, Cooper EA, Myers MT, Brenton Z, Rauh BL, Morris GP, Kresovich S (2016) Genome-Wide association studies of grain yield components in diverse sorghum germplasm. Plant Genome 9:1–17

Article  CAS  Google Scholar 

Boyles RE, Pfeiffer BK, Cooper EA, Zielinski KJ, Myers MT, Rooney WL, Kresovich S (2017) Quantitative trait loci mapping of agronomic and yield traits in two grain sorghum biparental families. Crop Sci 57:2443–2456

Article  CAS  Google Scholar 

Chen BR, Wang CY, Wang P, Zhu ZX, Xu N, Shi GS, Yu M, Wang N, Li JD, Hou JM, Li SJ, Zhou YF, Gao SJ, Lu XC, Huang RD (2019) Genome-wide association study for starch content and constitution in sorghum (Sorghum bicolor (L.) Moench). J Integra Agric 18:2446–2456

Article  CAS  Google Scholar 

Dai ZY, Tan J, Zhou C, Yang XF, Yang F, Zhang SJ, Sun SC, Miao XX, Shi ZY (2019) The OsmiR396–OsGRF8–OsF3H-flavonoid pathway mediates resistance to the brown planthopper in rice (Oryza sativa). Plant Biotechnol J 17:1657–1669

Article  CAS  PubMed  PubMed Central  Google Scholar 

Ding YQ, Zhou LB, Wang C, Cao N, Cheng B, Gao X, Peng Q, Shao MB, Zhang LY (2019) Research advance in glutinous sorghum for making sauce-flavor liquor in China. Biotechnol Bull 35:28–34

Google Scholar 

Ding YQ, Cao N, Zhou LB, Cheng B, Gao X, Wang C, Zou GH, Zhang LY (2020) Construction of EMS-induced mutant library and mutant screening in liquor-making waxy sorghum. J South Agric 51:2884–2891

CAS  Google Scholar 

Ding YQ, Xu JX, Wang C, Zhou LB, Zhang GB, Zhao Q, Shao MB, Zhang LY (2023) QTL mapping of grain traits related to brewing in sorghum based on super-GBS technology. J Nucl Agric Sci 37:0241–0250

Google Scholar 

Duan PG, Rao YC, Zeng DL, Yang YL, Xu R, Zhang BL, Dong GJ, Qian Q, Li YH (2014) SMALL GRAIN 1, which encodes a mitogen-activated protein kinase kinase 4, influences grain size in rice. Plant J 77:547–557

Article  CAS  PubMed  Google Scholar 

Feltus FA, Hart GE, Schertz KF, Casa AM, Kresovich S, Abraham S, Klein PE, Brown PJ, Paterson AH (2006) Alignment of genetic maps and QTLs between inter- and intra-specific sorghum populations. Theor Appl Genet 112:1295–1305

Article  CAS  PubMed  Google Scholar 

Feng Z, Cao N, Ding YQ, Xu JX, Gao X, Cheng B, Zou GH, Zhang LY (2022) Mapping QTL for sorghum physical properties using ultra-high-density bin map. J Plant Genet Resour 23:1746–1755

Google Scholar 

Feng J, Liu PF, Tu L, Gao Y, Guo XY, Wang AG, Zhu YF, Wu X, Chen ZH (2023) QTL Mapping and candidation gend analysis of maize kernel ralated traits. Seed 42:18–24

Google Scholar 

Gao X, Xu JX, Ding YQ, Wang L, Feng Z, Cao N, Cheng B, Zhang LY (2022) Analysis of physicochemical quality and cooking characteristics of brewer sorghum grains. Food Sci Technol 48:159–166

Google Scholar 

Gelli M, Mitchell SE, Liu K, Clemente TE, Weeks DP, Zhang C, Holding DR, Dweikat IM (2016) Mapping QTLs and association of differentially expressed gene transcripts for multiple agronomic traits under different nitrogen levels in sorghum. BMC Plant Biol 16:16

Article  PubMed  PubMed Central  Google Scholar 

Guindo D, Teme N, Vaksmann M, Doumbia M, Vilmus I, Guitton B, Sissoko A, Mestres C, Davrieux F, Fliedel G, Kouressy M, Courtois B, Rami JF (2019) Quantitative trait loci for sorghum grain morphology and quality traits: toward breeding for a traditional food preparation of West-Africa. J Cereal Sci 85:256–272

Article  Google Scholar 

Guo T, Lu ZQ, Shan JX, Ye WW, Dong NQ, Lin HX (2020) ERECTA1 acts upstream of the OsMKKK10-OsMKK4-OsMPK6 cascade to control spikelet number by regulating cytokinin metabolism in rice. Plant Cell 32:2763–2779

Article  CAS  PubMed  PubMed Central  Google Scholar 

Han LJ, Cai HW (2019) Progress on genetic research of sorghum grain weight. Biotechnol Buiietin 35:15–27

Google Scholar 

Han LJ, Chen J, Mace ES, Liu YS, Zhu MJ, Yuyama N, Jordan DR, Cai HW (2015) Fine mapping of qGW1, a major QTL for grain weight in sorghum. Theor Appl Genet 128:1813–1825

Article  CAS  PubMed  Google Scholar 

Hu Y, Liang WQ, Yin CS, Yang XL, Ping BZ, Li AX, Jia R, Chen MJ, Luo ZJ, Cai Q, Zhao XX, Zhang DB, Yuan Z (2015) Interactions of OsMADS1 with floral homeotic genes in rice flower development. Mol Plant 8:1366–1384

Article  CAS  PubMed  Google Scholar 

Li SG, Liu M, Liu F, Zou JQ, Lu XC, Diao XM (2021) Current status and future prospective of sorghum production and seed industry in China. Sci Agric Sin 54:471–482

Google Scholar 

Liu Q, Han RX, Wu K, Zhang JQ, Ye YF, Wang SF, Chen JF, Pan YJ, Li Q, Xu XP, Zhou JW, Tao DY, Wu YJ, Fu XD (2018) G-protein βγ subunits determine grain size through interaction with MADS-domain transcription factors in rice. Nat Commun 9:852

Article  PubMed  PubMed Central  Google Scholar 

Liu HH, Liu HQ, Zhou LN, Lin ZW (2019) Genetic architecture of domestication- and improvement-related traits using a population derived from sorghum virgatum and sorghum bicolor. Plant Sci 283:135–146

Article  CAS  PubMed  Google Scholar 

Lu QS (1999) Sorghum. China Agriculture Press, Beijing

Google Scholar 

Miao J, Yang ZF, Zhang DP, Wang YZ, Xu MB, Zhou LH, Wang J, Wu SJ, Yao YL, Du X, Gu FF, Gong ZY, Gu MH, Liang GH, Zhou Y (2019) Mutation of RGG2, which encodes a type B heterotrimeric G protein γ subunit, increases grain size and yield production in rice. Plant Biotechnol J 17:650–664

Article  CAS  PubMed  Google Scholar 

Mocoeur A, Zhang YM, Liu ZQ, Shen X, Zhang LM, Rasmussen SK, Jing HC (2015) Stability and genetic control of morphological, biomass and biofuel traits under temperate maritime and continental conditions in sweet sorghum (Sorghum bicolour). Theor Appl Genet 128:1685–1701

Article  CAS  PubMed  Google Scholar 

Morris GP, Ramu P, Deshpande SP, Hash CT, Shah T, Upadhyaya HD, Riera-Lizarazu O, Brown PJ, Acharya CB, Mitchell SE, Harriman J, Glaubitz JC, Buckler ES, Kresovich S (2013) Population genomic and genome-wide association studies of agroclimatic traits in sorghum. Proc Natl Acad Sci USA 110:453–458

Article  CAS  PubMed  Google Scholar 

Nagaraja RR, Madhusudhana R, Murali MS, Chakravarthi DV, Mehtre SP, Seetharama N, Patil JV (2013) Mapping QTL for grain yield and other agronomic traits in post-rainy sorghum [Sorghum bicolor (L.) Moench]. Theor Appl Genet 126:1921–1939

Article  Google Scholar 

Pereira MG, Ahnert D, Lee M, Klier K (1995) Genetic mapping of quantitative trait loci panicle characteristics and seed weight in sorghum. Brazil J Genet 18:249–257

CAS  Google Scholar 

Phuong NH, Stützel UR (2013) Quantitative trait loci associated to agronomic traits and yield components in a Sorghum bicolor L.Moench RIL population cultivated under pre-flowering drought and well-watered conditions. Agric Sci 4:781–791

Google Scholar 

Shehzad T, Okuno K (2015) QTL mapping for yield and yield-contributing traits in sorghum (Sorghum bicolor (L.) Moench) with genomebased SSR marker. Euphytica 203:17–31

Article  CAS  Google Scholar 

Shinoda (1958) Baijiu – the introduction of sorghum. Taiwan Elite Publishing Co Ltd, Taipei

Google Scholar 

Song XQ, Zhang BC, Zhou YH (2011) Golgi-localized UDP-glucose transporter is required for cell wall integrity in rice. Plant Signal Behav 6:1097–1100

Article  CAS  PubMed  PubMed Central  Google Scholar 

Tang SY, Xie Q (2019) Sorghum-biguse of small crops. Biotechnol. Bulletin 35:1

Google Scholar 

Tao YF, Mace E, George-Jaeggli B, Hunt C, Cruickshank A, Henzell R, Jordan D (2018) Novel grain weight loci revealed in a cross between cultivated and wild sorghum. Plant Genome 11:1921–1939

Article  Google Scholar 

Tao YF, Zhao XR, Wang XM, Hathorn A, Hunt C, Cruickshank AW, van Oosterom EJ, Godwin ID, Mace ES, Jordan DR (2020) Large-scale GWAS in sorghum reveals common genetic control of grain size among cereals. Plant Biotechnol J 18:1093–1105

Article  CAS  PubMed  Google Scholar 

Tao YF, Luo H, Xu JB, Cruickshank A, ZhaoXR TF, Hathorn A, Wu XY, Liu YM, Shatte T, Jordan D, Jing HC, Mace E (2021) Extensive variation within the pan-genome of cultivated and wild sorghum. Nat Plants 7:766–773

Article  CAS  PubMed  Google Scholar 

Wan LY, Zhang JF, Zhang HW, Zhang ZJ, Quan RD, Zhou SR, Huang RF (2011) Transcriptional activation of OsDERF1 in OsERF3 and OsAP2-39 negatively modulates ethylene synthesis and drought tolerance in rice. PLoS ONE 6:e25216

Article  CAS  PubMed  PubMed Central 

Comments (0)

No login
gif