LINC00654–SOX5 mRNA-miRNA-133a Compose New RNA Panel for Colorectal Cancer (CRC): A Potential Diagnostic Panel for CRC

Siegel, R.L., Miller, K.D., Fedewa, S.A., Ahnen, D.J., Meester, R.G.S., Barzi, A., and Jemal, A., Colorectal cancer statistics, 2017, Ca-Cancer J. Clin., 2017, vol. 67, no. 3, pp. 177–193.https://doi.org/10.3322/caac.21395

Article  PubMed  Google Scholar 

Metwally, I.S., Shetiwy, M., Elalfy, A.M., Abouzid, A., Saleh, S.S., and Hamdy, M., Epidemiology and survival of colon cancer among Egyptians: A retrospective study, J. Coloproctol., 2017, vol. 38.https://doi.org/10.1016/j.jcol.2017.09.418

Williams, C.D., Grady, W.M., and Zullig, L.L., Use of NCCN guidelines, other guidelines, and biomarkers for colorectal cancer screening, J. Natl. Compr. Cancer Network, 2016, vol. 14, no. 11, pp. 1479–1485.https://doi.org/10.6004/jnccn.2016.0154

Article  Google Scholar 

Wang, N., Lu, Y., Khankari, N.K., Long, J., Li, H.L., Gao, J., Gao, Y.T., Xiang, Y.B., Shu, X.O., and Zheng, W., Evaluation of genetic variants in association with colorectal cancer risk and survival in Asians, Int. J. Cancer, 2017, vol. 141, no. 6, pp. 1130–1139.https://doi.org/10.1002/ijc.30812

Article  CAS  PubMed  PubMed Central  Google Scholar 

Fearon, E.R. and Vogelstein, B.A., Genetic model for colorectal tumorigenesis, Cell, 1990, vol. 61, no. 5, pp. 759–767. https://doi.org/10.1016/0092-8674(90)90186-i

Slattery, M.L., Herrick, J.S., Pellatt, D.F., Stev-ens, J.R., Mullany, L.E., Wolff, E., Hoffman, M.D., Samowitz, W.S., and Wolff, R.K., MicroRNA profiles in colorectal carcinomas, adenomas, and normal colonic mucosa: Variations in miRNA expression and disease progression, Carcinogenesis, 2016, vol. 37, no. 3, pp. 245–261.https://doi.org/10.1093/carcin/bgv249

Article  CAS  PubMed  PubMed Central  Google Scholar 

Bartley, A.N., Yao, H., Barkoh, B.A., Ivan, C., Mishra, B.M., Rashid, A., Calin, G.A., Luthra, R., and Hamilton, S.R., Complex patterns of altered mi-croRNA expression during the adenoma-adenocarcinoma sequence for microsatellite-stable colorectal cancer, Clin. Cancer Res., 2011, vol. 17, no. 23, pp. 7283–7293.https://doi.org/10.1158/1078-0432.CCR-11-1452

Article  CAS  PubMed  PubMed Central  Google Scholar 

Kinzler, K.W. and Vogelstein, B., Lessons from hereditary colorectal cancer, Cell, 1996, vol. 87, no. 2, pp. 159–170.https://doi.org/10.1016/S0092-8674(00)81333-1

Article  CAS  PubMed  Google Scholar 

Muzny, D.M., Bainbridge, M.N., Chang, K., Dinh, H.H., Drummond, J.A., Fowler, G., Kovar, C.L., Lewis, L.R., Morgan, M.B., Newsham, I.F., et al., Comprehensive molecular characterization of human colon and rectal cancer, Nature, 2012, vol. 487, no. 7407, pp. 330–337.https://doi.org/10.1038/nature11252

Article  CAS  Google Scholar 

Shastri, Y.M., Loitsch, S., Hoepffner, N., Povse, N., Hanisch, E., Rösch, W., Mössner, J., and Stein, J.M., Comparison of an established simple office-based immunological FOBT with fecal tumor pyruvate kinase type M2 (M2-PK) for colorectal cancer screening: Prospective multicenter study, Am. J. Gastroenterol., 2008, vol. 103, no. 6, pp. 1496–1504. https://doi.org/10.1111/j.1572-0241.2008.01824

Ahlquist, D.A., Molecular detection of colorectal neoplasia, Gastroenterology, 2010, vol. 138, no. 6, pp. 2127–2139.https://doi.org/10.1053/j.gastro.2010.01.055

Article  CAS  PubMed  Google Scholar 

Takai, T., Kanaoka, S., Yoshida, K., Hamaya, Y., Ikuma, M., Miura, N., Sugimura, H., Kajimura, M., and Hishida, A., Fecal cyclooxygenase 2 plus matrix metalloproteinase 7 mRNA assays as a marker for colorectal cancer screening, Cancer Epidemiol., Biomarkers Prev., 2009, vol. 18, no. 6, pp. 1888–1893.https://doi.org/10.1158/1055-9965.EPI-08-0937

Article  CAS  PubMed  Google Scholar 

Wu, C.W., Ng, S.S., Dong, Y.J., Ng, S.C., Leung, W.W., Lee, C.W., Wong, Y.N., Chan, F.K., Yu, J., and Sung, J.J., Detection of miR-92a and miR‑21 in stool samples as potential screening biomarkers for colorectal cancer and polyps, Gut, 2012, vol. 61, no. 5, pp. 739–745. https://doi.org/10.1136/gut.2011.239236

Article  CAS  PubMed  Google Scholar 

Ponting, C.P., Oliver, P.L., and Reik, W., Evolution and functions of long noncoding RNAs, Cell, 2009, vol. 136, no. 4, pp. 629–641.https://doi.org/10.1016/j.cell.2009.02.006

Article  CAS  PubMed  Google Scholar 

Hu, G., Niu, F., Humburg, B.A., Liao, K., Bendi, S., Callen, S., Fox, H.S., and Buch, S., Molecular mechanisms of long noncoding RNAs and their role in disease pathogenesis, OncoTarget, 2018, vol. 9, no. 26, pp. 18648–18663.  https://doi.org/10.18632/oncotarget.24307

Article  PubMed  PubMed Central  Google Scholar 

Wang, K.C. and Chang, H.Y., Molecular mechanisms of long noncoding RNAs, Mol. Cell, 2011, vol. 43, no. 6, pp. 904–914.https://doi.org/10.1016/j.molcel.2011.08.018

Article  CAS  PubMed  PubMed Central  Google Scholar 

Akhade, V.S., Pal, D., and Kanduri, C., Long noncoding RNA: Genome organization and mechanism of action, Adv. Exp. Med. Biol., 2017, vol. 1008, pp. 47–74.https://doi.org/10.1007/978-981-10-5203-32

Article  CAS  PubMed  Google Scholar 

Deans, C. and Maggert, K.A., What do you mean, “epigenetic”?, Genetics, 2015, vol. 199, no. 4, pp. 887–896.https://doi.org/10.1534/genetics.114.173492

Article  CAS  PubMed  PubMed Central  Google Scholar 

Peterson, C.L. and Workman, J.L., Promoter targeting and chromatin remodeling by the SWI/SNF complex, Curr. Opin. Genet. Dev., 2000, vol. 10, no. 2, pp. 187–192.https://doi.org/10.1016/S0959-437X(00)00068-X

Article  CAS  PubMed  Google Scholar 

Wu, Q., Lian, J.B., Stein, J.L., Stein, G.S., Nickerson, J.A., and Imbalzano, A.N., The BRG1 AT-Pase of human SWI/SNF chromatin remodeling enzymes as a driver of cancer, Epigenomics, 2017, vol. 9, no. 6, pp. 919–931.https://doi.org/10.2217/epi-2017-0034

Article  CAS  PubMed  PubMed Central  Google Scholar 

Tang, Y., Wang, J., Lian, Y., Fan, C., Zhang, P., Wu, Y., Li, X., Xiong, F., Li, X., Li, G., Xiong, W., and Zeng, Z., Linking long non-coding RNAs and SWI/SNF complexes to chromatin remodeling in cancer, Mol. Cancer, 2017, vol. 16, no. 1, p. 42.https://doi.org/10.1186/s12943-017-0612-0

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lee, R.S. and Roberts, C.W., Linking the SWI/SNF complex to prostate cancer, Nat. Genet., 2013, vol. 45, no. 11, pp. 1268–1269.https://doi.org/10.1038/ng.2805

Article  CAS  PubMed  Google Scholar 

Chen, Z., Gao, Y., Yao, L., Liu, Y., Huang, L., Yan, Z., Zhao, W., Zhu, P., and Weng, H., LncFZD6 initiates Wnt/β-catenin and liver TIC self-renewal through BRG1-mediated FZD6 transcriptional activation, Oncogene, 2018, vol. 37, no. 23, pp. 3098–3112.https://doi.org/10.1038/s41388-018-0203-6

Article  CAS  PubMed  PubMed Central  Google Scholar 

Wang, Y., He, L., Du, Y., Zhu, P., Huang, G., Luo, J., Yan, X., Ye, B., Li, C., Xia, P., Zhang, G., Tian, Y., Chen, R., and Fan, Z., The long noncoding RNA lncTCF7 promotes self-renewal of human liver cancer stem cells through activation of Wnt signaling, Cell Stem Cell, 2015, vol. 16, no. 4, pp. 413–425.https://doi.org/10.1016/j.stem.2015.03.003

Article  CAS  PubMed  Google Scholar 

Deng, J., Mueller, M., Geng, T., Shen, Y., Liu, Y., Hou, P., Mamillapalli, R., Taylor, H.S., Paidas, M., and Huang, Y., Correction: H19 lncRNA alters methylation and expression of Hnf4α in the liver of metformin-exposed fetuses, Cell Death Dis., 2017, vol. 8, no. 12, p. e3175.https://doi.org/10.1038/s41419-019-1812-x

Article  PubMed  PubMed Central  Google Scholar 

Arab, K., Park, Y.J., Lindroth, A.M., Schäfer, A., Oakes, C., Weichenhan, D., Lukanova, A., Lundin, E., Risch, A., Meister, M., Dienemann, H., Dyckhoff, G., Herold-Mende, C., Grummt, I., Niehrs, C., and Plass, C., Long noncoding RNA TARID directs demethylation and activation of the tumor suppressor TCF21 via GADD45A, Mol. Cell, 2014, vol. 55, no. 4, pp. 604–614.https://doi.org/10.1016/j.molcel.2014.06.031

Article  CAS  PubMed  Google Scholar 

Jain, A.K., Xi, Y., McCarthy, R., Allton, K., Akdemir, K.C., Patel, L.R., Aronow, B., Lin, C., Li, W., Yang, L., and Barton, M.C., LncPRESS1 is a p53-regulated LncRNA that safeguards pluripotency by disrupting SIRT6-mediated de-acetylation of histone H3K56, Mol. Cell, 2016, vol. 64, no. 5, pp. 967–981.https://doi.org/10.1016/j.molcel.2016.10.039

Article  CAS  PubMed  PubMed Central  Google Scholar 

Xu, M., Chen, X., Lin, K., Zeng, K., Liu, X., Pan, B., Xu, X., Xu, T., Hu, X., Sun, L., He, B., Pan, Y., Sun, H., and Wang, S., The long noncoding RNA SN-HG1 regulates colorectal cancer cell growth through interactions with EZH2 and miR-154-5p, Mol. Cancer, 2018, vol. 17, no. 1, p. 141.https://doi.org/10.1186/s12943-018-0894-x

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