Bottasso E (2019) Toward the existence of a sympathetic neuroplasticity adaptive mechanism influencing the immune response. A hypothetical view—part I. Hypothesis and theory. Front Endocrinol. https://doi.org/10.3389/fendo.2019.00632

Article  Google Scholar 

Burdo TH, Lentz MR, Autissier P et al (2011) Soluble CD163 made by monocyte/macrophages is a novel marker of HIV activity in early and chronic infection prior to and after anti-retroviral therapy. J Infect Dis 204(1):154–163. https://doi.org/10.1093/infdis/jir214

Article  CAS  PubMed  PubMed Central  Google Scholar 

Epskamp S, Cramer AOJ, Waldorp LJ, Schmittmann VD, Borsboom D (2012) qgraph: network visualizations of relationships in psychometric data. J Stat Softw 48(4):1–18. https://doi.org/10.18637/jss.v048.i04

Godoy LD, Rossignoli MT, Delfino-Pereira P, Garcia-Cairasco N, de Lima Umeoka EH (2018) A comprehensive overview on stress neurobiology: basic concepts and clinical implications. Front Behav Neurosci 12:127. https://doi.org/10.3389/fnbeh.2018.00127

Article  PubMed  PubMed Central  Google Scholar 

Golino HF, Epskamp S (2017) Exploratory graph analysis: a new approach for estimating the number of dimensions in psychological research. PLoS ONE 12(6):e0174035. https://doi.org/10.1371/journal.pone.0174035

Article  CAS  PubMed  PubMed Central  Google Scholar 

Huang X, Liu X, Meyers K et al (2016) Cytokine cascade and networks among MSM HIV seroconverters: implications for early immunotherapy. Sci Rep 6:36234. https://doi.org/10.1038/srep36234

Article  CAS  PubMed  PubMed Central  Google Scholar 

Janitza S, Tutz G, Boulesteix A-L (2016) Random forest for ordinal responses: Prediction and variable selection. Computat Stat Data Anal 96:57–73. https://doi.org/10.1016/j.csda.2015.10.005

Article  Google Scholar 

Jason LA, Gaglio CL, Furst J et al (2022) Cytokine network analysis in a community-based pediatric sample of patients with myalgic encephalomyelitis/chronic fatigue syndrome. Chronic Illn. https://doi.org/10.1177/17423953221101606

Article  PubMed  Google Scholar 

Jekarl DW, Lee S, Kwon JH et al (2019) Complex interaction networks of cytokines after transarterial chemotherapy in patients with hepatocellular carcinoma. PLoS ONE 14(11):e0224318. https://doi.org/10.1371/journal.pone.0224318

Article  CAS  PubMed  PubMed Central  Google Scholar 

Joy MP, Brock A, Ingber DE, Huang S (2005) High-betweenness proteins in the yeast protein interaction network. J Biomed Biotechnol 2005(2):96–103. https://doi.org/10.1155/jbb.2005.96

Article  PubMed  PubMed Central  Google Scholar 

Lisco A, Introini A, Munawwar A et al (2012) HIV-1 imposes rigidity on blood and semen cytokine networks. Am J Reprod Immunol 68(6):515–521. https://doi.org/10.1111/aji.12015

Article  CAS  PubMed  PubMed Central  Google Scholar 

Low PA (1993) Composite autonomic scoring scale for laboratory quantification of generalized autonomic failure. Mayo Clin Proc 68(8):748–752

Article  CAS  PubMed  Google Scholar 

Martelli D, McKinley MJ, McAllen RM (2014) The cholinergic anti-inflammatory pathway: a critical review. Auton Neurosci 182:65–69. https://doi.org/10.1016/j.autneu.2013.12.007

Article  CAS  PubMed  Google Scholar 

Mueller B, Figueroa A, Robinson-Papp J (2022) Structural and functional connections between the autonomic nervous system, hypothalamic-pituitary-adrenal axis, and the immune system: a context and time dependent stress response network. Neurol Sci 43(2):951–960. https://doi.org/10.1007/s10072-021-05810-1

Article  PubMed  Google Scholar 

Nance DM, Sanders VM (2007) Autonomic innervation and regulation of the immune system (1987–2007). Brain Behav Immun 21(6):736–745. https://doi.org/10.1016/j.bbi.2007.03.008

Article  CAS  PubMed  PubMed Central  Google Scholar 

Németh T, Mócsai A (2016) Feedback amplification of neutrophil function. Trends Immunol 37(6):412–424. https://doi.org/10.1016/j.it.2016.04.002

Article  CAS  PubMed  Google Scholar 

Nistor GI, Dillman RO (2020) Cytokine network analysis of immune responses before and after autologous dendritic cell and tumor cell vaccine immunotherapies in a randomized trial. J Transl Med 18(1):176. https://doi.org/10.1186/s12967-020-02328-6

Article  CAS  PubMed  PubMed Central  Google Scholar 

Novak P (2011) Quantitative autonomic testing. J vis Exp. https://doi.org/10.3791/2502

Article  PubMed  PubMed Central  Google Scholar 

Opsahl T, Agneessens F, Skvoretz J (2010) Node centrality in weighted networks: Generalizing degree and shortest paths. Soc Networks 32(3):245–251. https://doi.org/10.1016/j.socnet.2010.03.006

Article  Google Scholar 

Pons P, Latapy M (2005) Computing Communities in Large Networks Using Random Walks. Springer, Berlin Heidelberg, pp 284–293

Google Scholar 

Rahman A, Tiwari A, Narula J, Hickling T (2018) Importance of feedback and feedforward loops to adaptive immune response modeling. CPT Pharmacometrics Syst Pharmacol 7(10):621–628. https://doi.org/10.1002/psp4.12352

Article  CAS  PubMed  PubMed Central  Google Scholar 

Robinson-Papp J, Nmashie A, Pedowitz E et al (2018) Vagal dysfunction and small intestinal bacterial overgrowth: novel pathways to chronic inflammation in HIV. AIDS 32(9):1147–1156. https://doi.org/10.1097/QAD.0000000000001802

Article  PubMed  Google Scholar 

Robinson-Papp J, Nmashie A, Pedowitz E et al (2019) The effect of pyridostigmine on small intestinal bacterial overgrowth (SIBO) and plasma inflammatory biomarkers in HIV-associated autonomic neuropathies. J Neurovirol 25(4):551–559. https://doi.org/10.1007/s13365-019-00756-9

Article  CAS  PubMed  PubMed Central  Google Scholar 

Robinson-Papp J, Sharma S, Simpson DM, Morgello S (2013) Autonomic dysfunction is common in HIV and associated with distal symmetric polyneuropathy. J Neurovirol 19(2):172–180. https://doi.org/10.1007/s13365-013-0160-3

Article  PubMed  PubMed Central  Google Scholar 

Robinson-Papp J, Sharma SK (2013) Autonomic neuropathy in HIV is unrecognized and associated with medical morbidity. AIDS Patient Care STDS 27(10):539–543. https://doi.org/10.1089/apc.2013.0188

Article  PubMed  PubMed Central  Google Scholar 

Sandler NG, Douek DC (2012) Microbial translocation in HIV infection: causes, consequences and treatment opportunities. Nat Rev Microbiol 10(9):655–666. https://doi.org/10.1038/nrmicro2848

Article  CAS  PubMed  Google Scholar 

Sharma D, Farrar JD (2020) Adrenergic regulation of immune cell function and inflammation. Semin Immunopathol 42(6):709–717. https://doi.org/10.1007/s00281-020-00829-6

Article  CAS  PubMed  PubMed Central  Google Scholar 

Sharma T, Kaur K (2021) Benchmarking deep learning methods for aspect level sentiment classification. Appl Sci 11(22):10542. https://doi.org/10.3390/app112210542

Article  CAS  Google Scholar 

Shive CL, Jiang W, Anthony DD, Lederman MM (2015) Soluble CD14 is a nonspecific marker of monocyte activation. AIDS 29(10):1263–1265. https://doi.org/10.1097/QAD.0000000000000735

Article  CAS  PubMed  Google Scholar 

Sweatt AJ, Hedlin HK, Balasubramanian V et al (2019) Discovery of distinct immune phenotypes using machine learning in pulmonary arterial hypertension. Circ Res 124(6):904–919. https://doi.org/10.1161/circresaha.118.313911

Article  CAS  PubMed  PubMed Central  Google Scholar 

Tenorio AR, Zheng Y, Bosch RJ et al (2014) Soluble markers of inflammation and coagulation but not T-cell activation predict non-AIDS-defining morbid events during suppressive antiretroviral treatment. J Infect Dis 210(8):1248–1259. https://doi.org/10.1093/infdis/jiu254

Article  CAS  PubMed  PubMed Central  Google Scholar 

Tien PC, Choi AI, Zolopa AR et al (2010) Inflammation and mortality in HIV-infected adults: analysis of the FRAM study cohort. J Acquir Immune Defic Syndr 55(3):316–322. https://doi.org/10.1097/QAI.0b013e3181e66216

Article  CAS  PubMed  PubMed Central  Google Scholar 

Tracey KJ (2009) Reflex control of immunity. Nat Rev Immunol 9(6):418–428. https://doi.org/10.1038/nri2566

Article  CAS  PubMed  PubMed Central  Google Scholar 

Trøseid M, Sönnerborg A, Nowak P (2011) High mobility group box protein-1 in HIV-1 infection. Curr HIV Res 9(1):6–10. https://doi.org/10.2174/157016211794582632

Article  PubMed  Google Scholar 

Wang H, Liao H, Ochani M et al (2004) Cholinergic agonists inhibit HMGB1 release and improve survival in experimental sepsis. Nat Med 10(11):1216–1221. https://doi.org/10.1038/nm1124

Article  CAS  PubMed