Accurate Identification of Leishmania Parasites in Sandflies by Polymorphism Analysis of COII Gene Using PCR and qPCR-HRM Techniques in Iranian Border with Iraq

1. Bates PA, Depaquit J, Galati EA, Kamhawi S, Maroli M, McDowell MA,
Picado A, Ready PD, Salomón D, Shaw JJ, Traub-Csekö YM, Warburg A
(2015) Recent advances in phlebotomine sand fly research related to leishmaniasis control. Parasit Vectors. 8:131.
2. Ghafari SM, Fotouhi-Ardakani R, Parvizi P (2020a) Designing and developing a high-resolution melting technique for accurate identification of Leishmania species by targeting amino acid permease 3 and cytochrome oxidase II genes using real-time PCR and in silico genetic evaluation. Acta Trop. 211: e105626.
3. Ghafari SM, Ebrahimi S, Nateghi- Rostami M, Bordbar A, Parvizi P (2020b) Comparative evaluation of salivary glands proteomes from wild Phlebotomus papatasi proven vector of zoonotic cutaneous leishmaniasis. Vet Med Sci. 00: 1–8.
4. Dostálová A, Volf P (2012) Leishmania development in sand flies: parasite-vector interactions overview. Parasit Vectors. 5:276.
5. Parvizi P, Ready PD (2008) Nested PCRs and sequencing of nuclear ITS-rDNA
fragments detect three Leishmania species of gerbils in sandflies from Iranian foci of zoonotic cutaneous leishmaniasis. Trop Med Int Health. 13(9): 1159–1171.
6. Müller KE, Zampieri RA, Aoki JI, Muxel SM, Nerland AH, Floeter-Winter LM (2018) Amino acid permease 3 (aap3) Coding sequence as a target for Leishmania identification and diagnosis of leishmaniases using high resolution
Melting analysis. Parasit Vectors. 11: 421.
7. Asfaram S, Fakhar M, Mirani N, Derakhshani‑niya M, Valadan R, Ziaei Hezarjaribi H, Emadi SN (2019) HRM–PCR is an accurate and sensitive technique
for the diagnosis of cutaneous leishmaniasis as compared with conventional PCR. Acta Parasitol. 65(2):310-316.
8. Fotouhi-Ardakani R, Dabiri S, Ajdari S, Alimohammadian MH, AlaeeNovin E,
Taleshi N, Parvizi P (2016) Assessment of nuclear and mitochondrial genes in precise identification and analysis of genetic polymorphisms for the evaluation of Leishmania parasites. Infect Genet Evol. 46: 33–41.
9. Karaku ŞM, Pekag Irba ŞM, Demir S, Eren H, Toz S, Özbel Y (2017) Molecular screening of Leishmania spp. infection and blood meals in sandflies from a leishmaniasis focus in southwestern Turkey. Med Vet Entomol. 31: 224–229.
10. Antonia AL, Wang L, Ko DC (2018) A real-time PCR assay for quantification of parasite burden in murine models of leishmaniasis. PeerJ. 6: e5905.
11. Galluzzi L, Ceccarelli M, Diotallevi A, Menotta M, Magnani M (2018) Real time PCR applications for diagnosis of leishmaniasis. Parasit Vectors. 11: 273.
12. Rojas-Jaimes J, Rojas-Palomino N, Pence J, Lescano AG (2019) Leishmania species in biopsies of patients with different clinical manifestations identified by high resolution melting and nested PCR in an Endemic district in Peru. Parasite Epidemiol Control. 3: e 00095.
13. Ahuja K, Vats A, Beg MA, Kariyawasam KKGDUL, Chaudhury A, Chatterjee M, Karunaweera ND, Selvapandiyan A (2020) High resolution melting based method for rapid discriminatory diagnosis of Frotorco-infecting Leptomonas seymouri in Leishmania donovani-induced leishmaniasis. Parasitol Int. 75: e102047.
14. Schönian G, Nasereddin A, Dinse N, Schweynoch C, Schallig HD, Presber W, Jaffe CL (2003)PCR diagnosis and characterization of Leishmania in local and imported clinical samples. Diagn Microbiol Infect Dis. 47(1): 349 ̶ 358.
15. Parvizi P, Benlarbi M, Ready PD (2003) Mitochondrial and Wolbachia markers for the sand fly Phlebotomus papatasi: little population differentiation between peridomestic sites and gerbil burrows in Isfahan province, Iran. Med Vet Entomol. 17: 351–362.
16. Green MR, Sambrook J (2012) Molecular cloning: a laboratory manual. Cold
Spring Harbor Laboratory Press, New York.
17. Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6:
molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 30(12): 2725– 2729.
18. Librado P, Rozas J (2009) DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics. 25(11): 1451–1452.
19. Tajima F (1996) The amount of DNA polymorphism maintained in a finite population when the neutral mutation rate varies among sites. Genetics. 143: 1457–1465.
20. Ibrahim ME, Barker DC (2001) The origin and evolution of the Leishmania donovani complex as inferred from a mitochondrial cytochrome oxidase II gene sequence. Infect Genet Evol. 1 (1): 61–68.
21. Yatawara L, Le TH, Wickramasinghe S, Agatsuma T (2008) Maxicircle (mitochondrial) genome sequence (partial) of Leishmania major: gene content, arrangement and composition compared with Leishmania tarentolae. Gene. 424 (1– 2): 80-86.
22. Babiker AM, Ravagnan S, Fusaro A, Hassan MM, Bakheit SM, Mukhtar MM, Cattoli G, Capelli G (2014) Concomitant infection with Leishmania donovani and L. major in single ulcers of Cutaneous Leishmaniasis patients from Sudan. J Trop Med. e170859.
23. Nebohacova M, KimCE SL, Maslov DA (2009) RNA editing and mitochondrial activity in promastigotes and amastigotes of Leishmania donovani. Int J Parasitol. 39:635–644.
24. Shaw JM, Campbell D, Simpson L (1989) Internal frameshifts within the mitochondrial genes for cytochromeoxidase subunit II and maxicircle unidentified reading frame 3 of Leishmania tarentolae are corrected by RNA editing: evidence for translation of the edited cytochrome oxidase subunit II mRNA. Proc Natl Acad Sci U S A. 86 (16): 6220–6224.
25. Cao DP, Guo XG, Chen DL, Chen JP (2011) Species delimitation and phylogenetic relationships of Chinese Leishmania isolates reexamined using kinetoplast cytochrome oxidase II gene sequences. Parasitol Res. 109:163–173.
26. Mirzaei A, Schweynoch C, Rouhani S, Parvizi P, Scho¨nian G (2014) Diversity of Leishmania species and of strains of Leishmania major isolated from desert rodents in different foci of cutaneous leishmaniasis in Iran. Trans R Soc Trop Med Hyg. 108: 502–512.
27. Haydon DT, Cleaveland S, Taylor LH, Laurenson MK (2002) Identifying reservoirs of infection: A conceptual and practical challenge. Emerg Infect Dis. 8(12): 1468–1473.
28. Yaghoobi-Ershadi M (2012) Phlebotomine sandflies (Diptera: Psychodidae) in Iran and their role on Leishmania transmission. J Arthropod Borne Dis. 6(1): 1.
29. Hernandez C, Alvarez C, Gonzalez C, Ayala MS, León CM, Ramírez JD (2014) Identification of six New World Leishmania species through the implementation of a High-Resolution Melting(HRM) genotyping assay. Parasite Vectors. 7: 501–508.
30. Zampieri RA, Laranjeira-Silva MF, Muxel SM, Stocco de Lima AC, Shaw JJ, Floeter-Winter LM (2016) High resolution melting analysis targeting hsp70 as a fast and efficient method for the discrimination of Leishmania species. PLoS Negl Trop Dis. 1–18.
31. Słomka M, Sobalska-Kwapis M, Wachulec M, Bartosz G, Strapagiel D (2017) High Resolution Melting (HRM) for High-Throughput Genotyping—Limitations and Caveats in Practical Case Studies. J Clin Child Adolesc Psychol. 18: 2316–2337.
32. Bezerra-Vasconcelos DR, Melo LM, Albuquerque ÉS, Luciano MCS, Bevilaqua CML (2011) Real-time PCR to assess the Leishmania load in Lutzomyia longipalpis sandflies: screening of target genes and assessment of quantitative methods. Exp Parasitol. 129: 234–239.
33. González E, Álvarez A, Ruiz S, Molina R, Jiménez M (2017) Detection of high Leishmania infantum loads in Phlebotomus perniciosus captured in the leishmaniasis focus of southwestern Madrid region (Spain) by real time PCR. Acta Trop. 171: 68–73.
34. Strelkova MV, Eliseev LN, Ponirovsky EN, Dergacheva TI, Evans DA(2001) Mixed leishmanial infections in Rhombomys optimus: a key to the persistence of Leishmania major from one transmission season to the next. Ann Trop Med Parasitol. 95: 811–819.

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