Aziz M, Brenner M, Wang P (2019) Extracellular CIRP (eCIRP) and inflammation. J Leukoc Biol 106(1):133–146. https://doi.org/10.1002/JLB.3MIR1118-443R

Article  CAS  Google Scholar 

Bailey TL, Boden M, Buske FA, Frith M, Grant CE, Clementi L, Ren J, Li WW, Noble WS (2009) MEME SUITE: tools for motif discovery and searching. Nucleic Acids Res 37:W202–W208. https://doi.org/10.1093/nar/gkp335

Article  CAS  Google Scholar 

Boehm T, McCurley N, Sutoh Y, Schorpp M, Kasahara M, Cooper MD (2012) VLR-based adaptive immunity. Annu Rev Immunol 30:203–220. https://doi.org/10.1146/annurev-immunol-020711-075038

Article  CAS  Google Scholar 

Brochu C, Cabrita MA, Melanson BD, Hamill JD, Lau R, Pratt MA, McKay BC (2013) NF-κB-dependent role for cold-inducible RNA binding protein in regulating interleukin 1β. PLoS One 8(2):e57426. https://doi.org/10.1371/journal.pone.0057426

Article  CAS  Google Scholar 

Chongsathidkiet P, Fecci PE (2021) Cold-inducible RNA-binding protein (CIRBP) as a biomarker to predict recurrence of brain metastases. Neuro Oncol 23(9):1419–1420. https://doi.org/10.1093/neuonc/noab122

Article  Google Scholar 

Diao J, Yu X, Wang X, Fan Y, Wang S, Li L, Wang Y, Xu L, Gai C, Ye H, Liu H (2020) Full-length transcriptome sequencing combined with RNA-seq analysis revealed the immune response of fat greenling (Hexagrammos otakii) to Vibrio harveyi in early infection. Microb Pathog 149:104527. https://doi.org/10.1016/j.micpath.2020.104527

Article  CAS  Google Scholar 

Horii Y, Shiina T, Uehara S, Nomura K, Shimaoka H, Horii K, Shimizu Y (2019) Hypothermia induces changes in the alternative splicing pattern of cold-inducible RNA-binding protein transcripts in a non-hibernator, the mouse. Biomed Res 40(4):153–161. https://doi.org/10.2220/biomedres.40.153

Article  CAS  Google Scholar 

Hu J, You F, Wang Q, Wang L, Weng S, Xin M (2015) Cloning and expression analysis of cold-tolerance related genes CIRBP and HMGB1 in Paralichthys olivaceus. Mar Sci 39(01):29–38

CAS  Google Scholar 

Hunt SE, McLaren W, Gil L, Thormann A, Schuilenburg H, Sheppard D, Parton A, Armean IM, Trevanion SJ, Flicek P, Cunningham F (2018) Ensembl variation resources. Database 119. https://doi.org/10.1093/database/bay119

Kumar S, Stecher G, Li M, Knyaz C, Tamura K (2018) MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol Biol Evol 35(6):1547–1549. https://doi.org/10.1093/molbev/msy096

Article  CAS  Google Scholar 

Liu J, Xue J, Zhang H, Li S, Liu Y, Xu D, Zou M, Zhang Z, Diao J (2015) Cloning, expression, and purification of cold inducible RNA-binding protein and its neuroprotective mechanism of action. Brain Res 1597:189–195. https://doi.org/10.1016/j.brainres.2014.11.061

Article  CAS  Google Scholar 

Letunic I, Bork P (2018) 20 years of the SMART protein domain annotation resource. Nucleic Acids Res 46(D1):D493–D496. https://doi.org/10.1093/nar/gkx922

Article  CAS  Google Scholar 

Lopez MA, Meier D, Wong WW, Fontana A (2015) TNF induced inhibition of Cirbp expression depends on RelB NF-κB signalling pathway. Biochem Biophys Rep 5:22–26. https://doi.org/10.1016/j.bbrep.2015.11.007

Article  Google Scholar 

Masuda T, Itoh K, Higashitsuji H, Higashitsuji H, Nakazawa N, Sakurai T, Liu Y, Tokuchi H, Fujita T, Zhao Y, Nishiyama H, Tanaka T, Fukumoto M, Ikawa M, Okabe M, Fujita J (2012) Cold-inducible RNA-binding protein (CIRP) interacts with Dyrk1b/Mirk and promotes proliferation of immature male germ cells in mice. Proc Natl Acad Sci USA 109(27):10885–10890. https://doi.org/10.1073/pnas.1121524109

Article  Google Scholar 

Miao L, Li M, Chen Y, Hu M, Chen J (2017) Cloning of cold inducible RNA-binding protein (CIRP) gene in Larimichthys crocea and its expression analysis under cold treatments. J Fisheries China 41(04):481–489. https://doi.org/10.1016/S0065-3233(05)70008-5

Article  Google Scholar 

Mitchell CD, Criscitiello MF (2020) Comparative study of cartilaginous fish divulges insights into the early evolution of primary, secondary and mucosal lymphoid tissue architecture. Fish Shellfish Immunol 107(Pt B):435–443. https://doi.org/10.1016/j.fsi.2020.11.006

Article  CAS  Google Scholar 

Nguyen N, Vincens P, RoestCrollius H, Louis A (2018) Genomicus 2018: karyotype evolutionary trees and on-the-fly synteny computing. Nucleic Acids Res 46(D1):D816–D822. https://doi.org/10.1093/nar/gkx1003

Article  CAS  Google Scholar 

Nikitina N, Bronner-Fraser M (2009) Sauka-Spengler T (2009) Microinjection of RNA and morpholino oligos into lamprey embryos. Cold Spring Harb Protoc 1:pdb.prot5123. https://doi.org/10.1101/pdb.prot5123

Article  Google Scholar 

Nishiyama H, Itoh K, Kaneko Y, Kishishita M, Yoshida O, Fujita J (1997) A glycine-rich RNA-binding protein mediating cold-inducible suppression of mammalian cell growth. J Cell Biol 137(4):899–908. https://doi.org/10.1083/jcb.137.4.899

Article  CAS  Google Scholar 

Pan F, Zarate J, Choudhury A, Rupprecht R, Bradley TM (2004) Osmotic stress of salmon stimulates upregulation of a cold inducible RNA binding protein (CIRP) similar to that of mammals and amphibians. Biochimie 86(7):451–461. https://doi.org/10.1016/j.biochi.2004.06.006

Article  CAS  Google Scholar 

Saito T, Sugimoto K, Adachi Y, Wu Q, Mori KJ (2000) Cloning and characterization of amphibian cold inducible RNA-binding protein. Comparative biochemistry and physiology. Comp Biochem Physiol B Biochem Mol Biol 125(2):237–245

Article  CAS  Google Scholar 

Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4(4):406–425. https://doi.org/10.1093/oxfordjournals.molbev.a040454

Article  CAS  Google Scholar 

Shiina T, Shimizu Y (2020) Temperature-dependent alternative splicing of precursor mRNAs and its biological significance: a review focused on post-transcriptional regulation of a cold shock protein gene in hibernating mammals. Int J Mol Sci 21(20):7599. https://doi.org/10.3390/ijms21207599

Article  CAS  Google Scholar 

Smith JJ, Kuraku S, Holt C, Sauka-Spengler T, Jiang N, Campbell, M S, Yandell MD, Manousaki,T, Meyer A, Bloom OE, Morgan JR, Buxbaum JD, Sachidanandam R, Sims C, Garruss AS., Cook M, Krumlauf R, Wiedemann LM, Sower SA, Decatur WA, … Li, W (2013) Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution. Nat Genet 45(4):415–421e4212. https://doi.org/10.1038/ng.2568