Agrawal R, Rebhun J, Yang J et al (2021) Mycobacterium celatum: a new pathogen of the pancreas. Am J Gastroenterol 116:s705. https://doi.org/10.14309/01.ajg.0000779776.56137.54

Article  Google Scholar 

Al-shaibani MM, Mohamed RMSR, Sidik NM et al (2021) Biodiversity of secondary metabolites compounds isolated from phylum actinobacteria and its therapeutic applications. Molecules 26:4504. https://doi.org/10.3390/molecules26154504

Article  CAS  PubMed  PubMed Central  Google Scholar 

Alonso-Sáez L, Díaz-Pérez L, Morán XAG (2015) The hidden seasonality of the rare biosphere in coastal marine bacterioplankton. Environ Microbiol 17:3766–3780. https://doi.org/10.1111/1462-2920.12801

Article  PubMed  Google Scholar 

Amin DH, Abdallah NA, Abolmaaty A et al (2020) Microbiological and molecular insights on rare actinobacteria harboring bioactive prospective. Bull Natl Res Cent. https://doi.org/10.1186/s42269-019-0266-8

Article  Google Scholar 

Araujo JF, Castro AP, Costa MMC et al (2012) Characterization of soil bacterial assemblies in Brazilian savanna-like vegetation reveals acidobacteria dominance. Microb Ecol 64:760–770. https://doi.org/10.1007/s00248-012-0057-3

Article  CAS  PubMed  Google Scholar 

Araujo ASF, Bezerra WM, Santos VM et al (2017) Distinct bacterial communities across a gradient of vegetation from a preserved Brazilian Cerrado. Antonie Van Leeuwenhoek 110:457–469. https://doi.org/10.1007/s10482-016-0815-1

Article  PubMed  Google Scholar 

Araújo ASF, Rocha SMB, Antunes JEL et al (2019) What do we know about microbial genetic resources of soil in Cerrado areas in the Sete Cidades National Park? Revista De Recursos Genéticos - RG News 5:11–15

Google Scholar 

Azman AS, Othman I, Velu SS, Chan KG, Lee LH (2015) Mangrove rare actinobacteria: taxonomy, natural compound, and discovery of bioactivity. Front Microbiol. https://doi.org/10.3389/fmicb.2015.00856

Article  PubMed  PubMed Central  Google Scholar 

Bao Y, Dolfing J, Guo Z et al (2021) Important ecophysiological roles of non-dominant actinobacteria in plant residue decomposition, especially in less fertile soils. Microbiome. https://doi.org/10.1186/s40168-021-01032-x

Article  PubMed  PubMed Central  Google Scholar 

Barros EVSA, Manfio GP, Maitan VR et al (2003) Nocardia cerradoensis sp. nov., a novel isolate from Cerrado soil in Brazil. Int J Syst Evol Microbiol 53:29–33. https://doi.org/10.1099/ijs.0.02020-0

Article  CAS  Google Scholar 

Belov AA, Cheptsov VS, Vorobyova EA et al (2019) Stress-tolerance and taxonomy of culturable bacterial communities isolated from a Central Mojave Desert soil sample. Geosci 9:166. https://doi.org/10.3390/geosciences9040166

Article  CAS  Google Scholar 

Bokulich NA, Kaehler BD, Rideout JR et al (2018) Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin. Microbiome 6:90. https://doi.org/10.1186/s40168-018-0470-z

Article  PubMed  PubMed Central  Google Scholar 

Bolyen E, Rideout JR, Dillon MR et al (2019) Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nat Biotechnol 37:852–857. https://doi.org/10.1038/s41587-019-0209-9

Article  CAS  PubMed  PubMed Central  Google Scholar 

Bull AT, Idris H, Sanderson R et al (2017) High altitude, hyper-arid soils of the Central-Andes harbor mega-diverse communities of actinobacteria. Extremophiles 22:47–57. https://doi.org/10.1007/s00792-017-0976-5

Article  PubMed  PubMed Central  Google Scholar 

Bundale S, Pathak A (2022) Anti-Quorum sensing compounds from rare actinobacteria. In Actinobacteria - diversity, applications and medical aspects. IntechOpen. https://doi.org/10.5772/intechopen.106526

Article  Google Scholar 

Callahan BJ, McMurdie PJ, Rosen MJ et al (2016) DADA2: high-resolution sample inference from Illumina amplicon data. Nat Methods 13:581–583. https://doi.org/10.1038/nmeth.3869

Article  CAS  PubMed  PubMed Central  Google Scholar 

Campbell BJ, Yu L, Heidelberg JF et al (2011) Activity of abundant and rare bacteria in a coastal ocean. Proc Natl Acad Sci 108:12776–12781. https://doi.org/10.1073/pnas.1101405108

Article  PubMed  PubMed Central  Google Scholar 

Cardinale M, Ratering S, Sadeghi A et al (2020) The response of the soil microbiota to long-term mineral and organic nitrogen fertilization is stronger in the bulk soil than in the rhizosphere. Genes 11:456. https://doi.org/10.3390/genes11040456

Article  CAS  PubMed  PubMed Central  Google Scholar 

Carrano L, Abbondi M, Turconi P et al (2015) A novel microbisporicin producer identified by early dereplication during lantibiotic screening. BioMed Res Int 2015:1–10. https://doi.org/10.1155/2015/419383

Article  CAS  Google Scholar 

Chang HY, Tsai WC, Lee TF et al (2021) Mycobacterium gordonae infection in immunocompromised and immunocompetent hosts: a series of seven cases and literature review. J Formos Med Assoc 120:524–532. https://doi.org/10.1016/j.jfma.2020.06.029

Article  PubMed  Google Scholar 

Cui Y, Fang L, Guo X et al (2018) Responses of soil microbial communities to nutrient limitation in the desert-grassland ecological transition zone. Sci Total Environ 642:45–55. https://doi.org/10.1016/j.scitotenv.2018.06.033

Article  CAS  PubMed  Google Scholar 

Daoussis D, Kolonitsiou F, Militsopoulou M et al (2019) First report of Mycobacterium celatum-induced arthritis. Rheumatology 59:1772–1773. https://doi.org/10.1093/rheumatology/kez586

Article  Google Scholar 

Davidovich N, Pretto T, Blum S et al (2019) Mycobacterium gordonae infecting redclaw crayfish Cherax quadricarinatus. Dis Aquat Org 135:169–174. https://doi.org/10.3354/dao03392

Article  CAS  Google Scholar 

Debroas D, Hugoni M, Domaizon I (2015) Evidence for an active rare biosphere within freshwater protists community. Mol Ecol 24:1236–1247. https://doi.org/10.1111/mec.13116

Article  CAS  PubMed  Google Scholar 

Demmin MD, Gillissen A (2019) A rare case of pulmonary mycobacteriosis caused by rifabutin resistant Mycobacterium celatum and review of the literature. Respir Med Case Rep 28:100903. https://doi.org/10.1016/j.rmcr.2019.100903

Article  Google Scholar 

Dhakal D, Rayamajhi V, Mishra R et al (2019) Bioactive molecules from Nocardia: diversity, bioactivities and biosynthesis. J Ind Microbiol Biotechnol 46:385–407. https://doi.org/10.1007/s10295-018-02120-y

Article  CAS  PubMed  Google Scholar 

Ding T, Yang LJ, Zhang WD et al (2019) The secondary metabolites of rare actinomycetes: chemistry and bioactivity. RSC Adv 9:21964–21988. https://doi.org/10.1039/c9ra03579f

Article  CAS  PubMed  PubMed Central  Google Scholar 

Drummond AJ, Newcomb RD, Buckley TR et al (2015) Evaluating a multigene environmental DNA approach for biodiversity assessment. GigaScience. https://doi.org/10.1186/s13742-015-0086-1

Article  PubMed  PubMed Central  Google Scholar 

Faith DP (1992) Conservation evaluation and phylogenetic diversity. Biol Conserv 61:1–10. https://doi.org/10.1016/0006-3207(92)91201-3

Article  Google Scholar 

Falkinham JO (2021) Ecology of Nontuberculous Mycobacteria Microorganisms 9:2262. https://doi.org/10.3390/microorganisms9112262

Article  CAS  PubMed  Google Scholar 

Fang BZ, Salam N, Han MX et al (2017) Insights on the effects of heat pretreatment, pH, and calcium salts on isolation of rare actinobacteria from Karstic caves. Front Microbiol. https://doi.org/10.3389/fmicb.2017.01535

Article  PubMed