Cytomolecular trends in Chamaecrista Moench (Caesalpinioideae, Leguminosae) diversification

Bandel G (1974) Chromosome numbers and evolution in the Leguminosae. Caryologia 27 1:17–32. https://doi.org/10.1080/00087114.1974.10796558

Article  Google Scholar 

Biondo E, Miotto STS, Schifino-Wittmann MT (2005) Números cromossômicos e implicações sistemáticas em espécies Da subfamília Caesalpinioideae (Leguminosae) ocorrentes na região Sul do Brasil. Rev Bras Botânica 28:797–808. https://doi.org/10.1590/S0100-84042005000400014

Article  Google Scholar 

Biondo E, Miotto STS, Schifino-Wittmann MT (2006) Cytogenetics of species of Chamaecrista (Leguminosae – Caesalpinioideae) native to southern Brazil. Bot J Linn Soc 150:429–439. https://doi.org/10.1111/j.1095-8339.2006.00480.x

Article  Google Scholar 

Cannon SB, McKain MR, Harkess A et al (2015) Multiple polyploidy events in the early radiation of nodulating and nonnodulating legumes. Mol Biol Evol 32:193–210. https://doi.org/10.1093/molbev/msu296

Article  CAS  PubMed  Google Scholar 

Chiavegatto RB, Carta A, Pereira DGS et al (2020) Reconstructing ancestral chromosome numbers and inflorescence features in Eleusininae (Poaceae: Chloridoideae: Cynodonteae). Bot J Linn Soc 193:402–418. https://doi.org/10.1093/botlinnean/boaa015

Article  Google Scholar 

Clarkson JJ, Dodsworth S, Chase MW (2017) Time-calibrated phylogenetic trees establish a lag between polyploidisation and diversification in Nicotiana (Solanaceae). Plant Syst Evol 303:1001–1012. https://doi.org/10.1007/s00606-017-1416-9

Article  Google Scholar 

Conceição AS, Queiroz LP, Lewis GP et al (2009) Phylogeny of Chamaecrista Moench (Leguminosae­Caesalpinioideae) based on nuclear and chloroplast DNA regions. Taxon 58:1168–1180. https://doi.org/10.1002/tax.584010

Article  Google Scholar 

Cordeiro JMP, Felix LP (2018) Intra- and interspecific karyotypic variations of the genus Senna Mill. Caesalpinioideae) Acta Bot Brasilica 32:128–134. https://doi.org/10.1590/0102-33062017abb0274. Fabaceae

Article  Google Scholar 

de Souza AO, Lewis GP, da Silva MJ (2021) A new infrageneric classification of the pantropical genus Chamaecrista (Fabaceae: Caesalpinioideae) based on a comprehensive molecular phylogenetic analysis and morphology. Bot J Linn Soc 1–46. https://doi.org/10.1093/botlinnean/boab029

Doležel J, Greilhuber J, Suda J (2007) Estimation of nuclear DNA content in plants using flow cytometry. Nat Protoc 2:2233–2244. https://doi.org/10.1038/nprot.2007.310

Article  CAS  PubMed  Google Scholar 

Dong F, Song J, Naess SK et al (2000) Development and applications of a set of chromosome-specific cytogenetic DNA markers in potato. Theor Appl Genet 101:1001–1007. https://doi.org/10.1007/s001220051573

Article  CAS  Google Scholar 

Doyle J, Doyle J (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19:11–15

Google Scholar 

Du Y, Bi Y, Zhang M et al (2017) Genome size diversity in Lilium (Liliaceae) is correlated with karyotype and environmental traits. Front Plant Sci 8:1–11. https://doi.org/10.3389/fpls.2017.01303

Article  Google Scholar 

Fidalgo O, Bononi V (1984) Técnicas De Coleta, preservação e herborização de material botânico. Instituto de Botânica, São Paulo

Google Scholar 

Gagnon E, Ringelberg JJ, Bruneau A et al (2019) Global succulent biome phylogenetic conservatism across the pantropical Caesalpinia Group (Leguminosae). New Phytol 222:1994–2008. https://doi.org/10.1111/nph.15633

Article  PubMed  Google Scholar 

Glick L, Mayrose I (2014) ChromEvol: assessing the pattern of chromosome number evolution and the inference of Polyploidy along a phylogeny. Mol Biol Evol 31:1914–1922. https://doi.org/10.1093/molbev/msu122

Article  CAS  PubMed  Google Scholar 

Guerra M, Souza MD (2002) Como observar cromossomos: um guia de técnicas em citogenética vegetal, animal e humana. FUNPEC, Ribeirão Preto, p 201

Google Scholar 

Irwin HS, Turner BL (1960) Chromosomal relationships and taxonomic considerations in the genus Cassia. Am J Bot 47:309–318. https://doi.org/10.1002/j.1537-2197.1960.tb07130.x

Article  Google Scholar 

Koenen EJM, Ojeda DI, Bakker FT et al (2021) The origin of the Legumes is a Complex Paleopolyploid Phylogenomic Tangle closely Associated with the cretaceous–paleogene (K–Pg) Mass extinction event. Syst Biol 70:508–526. https://doi.org/10.1093/sysbio/syaa041

Article  PubMed  Google Scholar 

Kovarik A, Dadejova M, Lim YK et al (2008) Evolution of rDNA in Nicotiana allopolyploids: a potential link between rDNA homogenization and epigenetics. Ann Bot 101:815–823. https://doi.org/10.1093/aob/mcn019

Article  CAS  PubMed  PubMed Central  Google Scholar 

Legendre P, Legendre L (2012) Numerical ecology. Elsevier

Legume Phylogeny Working Group (LPWG) (2023) The World checklist of vascular plants (WCVP): Fabaceae. Royal Botanic Gardens Kew. https://doi.org/10.15468/mvhaj3

Article  Google Scholar 

Lewis G (2005) Tribo Cassieae. In: Schrire B, Mackinder B, Lock M (eds) Legumes of the world. Royal Botanic Gardens, Kew, pp 111–124

Google Scholar 

Lyu H, He Z, Wu C-I, Shi S (2018) Convergent adaptive evolution in marginal environments: unloading transposable elements as a common strategy among mangrove genomes. New Phytol 217:428–438. https://doi.org/10.1111/nph.14784

Article  CAS  PubMed  Google Scholar 

Maddison W, Maddison D (2011) Mesquite: a modular system for evolutionary analysis. Version 2.75. http://www.mesquiteproject.org

Marazzi B, Sanderson MJ (2010) Large-scale patterns of diversification in the widespread legume genus Senna and the evolutionary role of extrafloral nectaries. Evol (NY) 64:3570–3592. https://doi.org/10.1111/j.1558-5646.2010.01086.x

Article  Google Scholar 

Marie D, Brown SC (1993) A cytometric exercise in plant DNA histograms, with 2 C values for 70 species. Biol Cell 78:41–51. https://doi.org/10.1016/0248-4900(93)90113-S

Article  CAS  PubMed  Google Scholar 

Mata-Sucre Y, Sader M, Van-Lume B et al (2020) How diverse is heterochromatin in the Caesalpinia group? Cytogenomic characterization of Erythrostemon Hughesii Gagnon & GP Lewis (Leguminosae: Caesalpinioideae). Planta 252:1–14. https://doi.org/10.1007/s00425-020-03453-8

Article  CAS  Google Scholar 

Mata-Sucre Y, Costa L, Gagnon E et al (2020a) Revisiting the cytomolecular evolution of the Caesalpinia group (Leguminosae): a broad sampling reveals new correlations between cytogenetic and environmental variables. Plant Syst Evol 306:48. https://doi.org/10.1007/s00606-020-01674-8

Article  CAS  Google Scholar 

Mayrose I, Barker MS, Otto SP (2010) Probabilistic models of chromosome number evolution and the inference of Polyploidy. Syst Biol 59:132–144. https://doi.org/10.1093/sysbio/syp083

Article  PubMed  Google Scholar 

Montenegro C, do Vale Martins L, Bustamante FO et al (2022) Comparative cytogenomics reveals genome reshuffling and centromere repositioning in the legume tribe Phaseoleae. Chromosome Res 1–16. https://doi.org/10.1007/s10577-022-09702-8

Ohri D, Kumar A, Pal M (1986) Correlations between 2 C DNA values and habit in Cassia (Leguminosae:Caesalpinioideae). Plant Syst Evol 153:223–227. https://doi.org/10.1007/BF00983689

Article  CAS  Google Scholar 

Pellerin RJ, Waminal NE, Kim HH (2019) FISH mapping of rDNA and telomeric repeats in 10 Senna species. Hortic Environ Biotechnol 60:253–260. https://doi.org/10.1007/s13580-018-0115-y

Article  CAS  Google Scholar 

Posada D (2008) jModelTest: phylogenetic Model Averaging. Mol Biol Evol 25:1253–1256. https://doi.org/10.1093/molbev/msn083

Article  CAS  PubMed  Google Scholar 

Price MN, Dehal PS, Arkin AP (2009) FastTree: computing large minimum evolution trees with profiles instead of a distance matrix. Molecular biology and evolution 26:1641–1650. https://doi.org/10.1093/molbev/msp077

Puttick MN, Clark J, Donoghue PCJ (2015) Size is not everything: rates of genome size evolution, not C-value, correlate with speciation in Angiosperms. Proc R Soc B Biol Sci 282:20152289. https://doi.org/10.1098/rspb.2015.2289

Article  CAS  Google Scholar 

Qiu F, Baack EJ, Whitney KD et al (2019) Phylogenetic trends and environmental correlates of nuclear genome size variation in Helianthus sunflowers. New Phytol 221:1609–1618. https://doi.org/10.1111/nph.15465

Article  CAS  PubMed  Google Scholar 

Rambaut A (2007) FigTree, a graphical viewer of phylogenetic trees. http://tree.bio.ed.ac.uk/software/figtree

Rando JG, Pirani JR (2011) Padrões de distribuição geográfica das espécies de Chamaecrista sect. Chamaecrista ser. Coriaceae (Benth.) H.S.Irwin & Barneby, Leguminosae - Caesalpinioideae. Brazilian J Bot 34:499–513. https://doi.org/10.1590/S0100-84042011000400004

Rando JG, Zuntini AR, Conceição AS et al (2016) Phylogeny of Chamaecrista ser. Coriaceae (Leguminosae) Unveils a Lineage Recently Diversified in Brazilian Campo Rupestre Vegetation. Int J Plant Sci 177:3–17. https://doi.org/10.1086/683846

Rando JG, Cota MMT, de Lima AG et al (2023) Tribe Cassieae. In: Bruneau A, Ringelberg J, Queiroz LP (Eds) Advances in Legume Systematics 14. Classification of Caesalpinioideae Part 2. In Press, Phytokeys

Roa F, Guerra M (2015) Non-random distribution of 5S rDNA sites and its association with 45S rDNA in plant chromosomes. Cytogenet Genome Res 146:243–249. https://doi.org/10.1159/000440930

Article  CAS  PubMed  Google Scholar 

Ronquist F, Huelsenbeck JP (2003) MrBayes 3: bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574. https://doi.org/10.1093/bioinformatics/btg180

Article  CAS  PubMed  Google Scholar 

Rosito JM, Batista LRM (1985) Leguminosas Caesalpinioideae E Mimosoideae nativas do RS, com valor forrageiro - Uma Revisão. Ciência e Nat 7:163. https://doi.org/10.5902/2179460X25420

Article  Google Scholar 

Schubert I, Lysak MA (2011) Interpretation of karyotype evolution should consider chromosome structural constraints. Trends Genet 27:207–216. https://doi.org/10.1016/j.tig.2011.03.004

Article  CAS  PubMed  Google Scholar 

Souza V, Bortoluzzi R (2015) Chamaecrista Moench. In: List. Espécies da Flora do Bras. http://floradobrasil.jbrj.gov.br/jabot/floradobrasil/FB22876

Souza V, Lorenzi H (2008) Botânica Sistemática: guia ilustrado para identificação das familias brasileiras de fanerógamas nativas e exóticas no Brasil, baseado em APG II. Instituto Plantarum, Nova Odessa

Google Scholar 

Souza LGR, Crosa O, Speranza P, Guerra M (2012) Cytogenetic and molecular evidence suggest multiple origins and geographical parthenogenesis in Nothoscordum gracile (Alliaceae). Ann Bot 109:987–999. https://doi.org/10.1093/aob/mcs020

Article  CAS  PubMed  PubMed Central  Google Scholar 

留言 (0)

沒有登入
gif