Abadía-Cardoso A., Hernández-Guzmán R., Varela-Romero A., Garza J. C. and León G. D. 2021 Population genetics and species distribution modeling highlight conservation needs of the endemic trout from the Northern Sierra Madre Occidental. Conserv. Genet. 22, 629–643.
Abdul-Muneer P. M. 2014 Application of microsatellite markers in conservation genetics and fisheries management: recent advances in population structure analysis and conservation strategies. Genet. Res. Int. 1–11, 691759.
Abdul Muneer P. M., Gopalakrishnan A., Musammilu K. K., Mohindra V., Lal K. K., Basheer V. S. et al. 2009 Genetic variation and population structure of endemic yellow catfish, Horabagrus brachysoma (Bagridae) among three populations of Western Ghat region using RAPD and microsatellite markers. Mol. Biol. Rep. 36, 1779–1791.
Article CAS PubMed Google Scholar
Abdul Muneer P. M., Gopalakrishnan A., Musammilu K. K., Basheer V. S., Mohindra V., Lal K. K. et al. 2012 Comparative assessment of genetic variability in the populations of endemic and endangered Yellow Catfish, Horabagrus brachysoma (Teleostei: Horabagridae), based on allozyme, RAPD, and microsatellite markers. Biochem. Genet. 50, 192–212
Article CAS PubMed Google Scholar
Ali S. 2017 Current status and strategies of rainbow trout Oncorhynchus mykiss farming in India. Int. J. Aquacult. 7, 23–30
Anon 1987 Trout fishery in Nilgiris. Directorate of Fisheries, Madras, Information Brochure 9, 13.
Apostolidis A. P., Madeira M. J., Hansen M. M. and Machordom A. 2008 Genetic structure and demographic history of brown trout (Salmo trutta) populations from the southern Balkans. Freshw. Biol. 53, 1555–1566.
Arias-Pérez A., Fernández-Tajes J., Gaspar M. B. and Méndez J. 2012 Isolation of microsatellite markers and analysis of genetic diversity among east atlantic populations of the sword razor shell Ensis siliqua: a tool for population management. Biochem. Genet. 50, 397–415.
Barat A., Sahoo P. K., Kumar R., Mir J. I., Ali S., Patiyal R. S. and Singh A. K. 2015 Molecular characterization of rainbow trout, Oncorhynchus mykiss (Walbaum, 1792) stocks in India. J. Genet. 94, 13–18.
Bielikova O., Tarasjuk S., Mruk A., Zaloilo O. and Didenko A. 2021 Microsatellite-based analysis of genetic diversity and population structure of rainbow trout (Oncorhynchus mykiss) Cultured in Ukraine. Genet. Aquat. 5, 29–39.
Binur R. and Pancoro A. D. I. 2017 Inbreeding depression level of post-larvae freshwater prawn (Macrobrachium rosenbergii) from several hatcheries in Java. Indonesia. Biodiversitas. 18, 609–618.
Behnke R. J. 1992 Native trout of western North America. American Fisheries Society Monograph 6, pp. 275. Bethesda.
Day F. 1873 The fishes of India, being a natural history of the fishes known inhabit the seas and freshwaters of India, Burma & Ceylon. Vols I & II. Today and Tomorrow’s Book Agency, New Delhi.
Devaa J. C. and Ramesh U. 2021 Current status of rainbow trout in Western Ghats, Southern India: A fish diversity and water quality assessment study. Indian J. Ecol. 48, 549–557.
Devaa J. W., Sharma A. and Uthandakalaipandian R. 2021 Current status of rainbow trout, Oncorhynchus mykiss (Walbaum, 1792), Fisheries in Munnar hills of south India. Asian Fish. Sci. 34, 344–354.
Devaa W. and Ramesh U. 2022 Remembering the remnants of trout fisheries in the Nilgiris, Western Ghats. South India. Curr. Sci. 122, 384.
Devaa W. and Ramesh U. 2023 Remnants of the rainbow trout (Oncorhynchus mykiss) stock in Kodaikanal hills, Western Ghats. South India. Curr. Sci. 125, 113.
Deiner K., Garza J. C., Coey R. and Girman D. J. 2007 Population structure and genetic diversity of trout (Oncorhynchus mykiss) above and below natural and man-made barriers in the Russian River. California. Conserv. Genet. 8, 437–454.
Dieringer D. and Schlötterer C. 2003 Microsatellite analyser (MSA): a platform independent analysis tool for large microsatellite data sets. Mol. Ecol. Notes 3, 167–169.
Eaton K. R., Loxterman J. L. and Keeley E. R. 2018 Connections and containers: using genetic data to understand how watershed evolution and human activities influence cutthroat trout biogeography. PLoS One 13, e0202043.
Article PubMed PubMed Central Google Scholar
Evanno G., Regnaut S. and Goudet J. 2005 Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol. Ecol. 14, 2611–2620.
Article CAS PubMed Google Scholar
Excoffier L. and Lischer H. E. 2010 Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol. Ecol. Resour. 10, 564–567.
Fernandes C. R. M., Martins C. F., Ferreira K. M. and Del Lama M. A. 2012 Gene variation, population differentiation, and sociogenetic structure of nests of Partamona seridoensis (Hymenoptera: Apidae, Meliponini). Biochem. Genet. 50, 325–335.
Article CAS PubMed Google Scholar
Freyhof J. 2011 Salmo trutta. The IUCN Red List of Threatened Species 2011: e.T19861A9050312. https://doi.org/10.2305/IUCN.UK.2008.RLTS.T19861A9050312.en (accessed last on 25.03.2022).
Garza J. C. and Williamson E. G. 2001 Detection of reduction in population size using data from microsatellite loci. Mol. Ecol. 10, 305–318.
Article CAS PubMed Google Scholar
Gjedrem T. (ed.) 2005 Selection and breeding programs in aquaculture, vol. 2005, pp. 360. Dordrecht, The Netherlands..
Gopalakrishnan A., Lal K. K. and Ponniah A. G. 1999 Conservation of the Nilgiri rainbow trout in India. Naga: ICLARM Q, the World Fish Center. 22, 16–19.
Gross R., Lulla P. and Paaver T. 2007 Genetic variability and differentiation of rainbow trout (Oncorhynchus mykiss) strains in northern and Eastern Europe. Aquaculture 272, S139–S146.
Hansen M. M., Kenchington E. and Nielsen E. E. 2001 Assigning individual fish to populations using microsatellite DNA markers. Fish Fish. 2, 93–112.
Hassan N. U. and Pandey D. N. 2012 Present status of trout fisheries in Jammu and Kashmir. IOSR J. Pharm. 2, 35–37.
ICAR-DCFR 2021 Annual report 2021 ICAR-Directorate of Coldwater Fisheries Research, Bhimtal, Uttarakhand, India
Jan M., Jan N. and Ahmed I. 2018 Length weight relationship (LWR) and condition factor (K) of Brown Trout, Salmo trutta fario. J. Ecophysiol. Occup. Health. 73-79.
Jhingran V. G. and Sehgal K. L. 1978 Coldwater fisheries of India. Inland Fisheries Society of India. p. 239.
Kalinowski S. T., Taper M. L. and Marshall T. C. 2007 Revising how the computer program CERVUS accommodates genotyping error increases success in paternity assignment. Mol. Ecol. 16, 1099–1106.
Kohout J., Šedivá A., Apostolou A., Stefanov T., Marić S., Gaffaroğlu M. et al. 2013 Genetic diversity and phylogenetic origin of brown trout Salmo trutta populations in eastern Balkans. Biologia. 68, 1229–1237.
Kuruppan 1989 Present status, prospects and future scope of fisheries in upland waters of Tamil Nadu. In Proceedings of the National Workshop on Research and Development Needs of Coldwater Fisheries, Haldwani. Abstract No. 12.
Liu Z. J. and Cordes J. F. 2004 DNA marker technologies and their applications in aquaculture genetics. Aquaculture 238, 1–37.
Mackay W. S. S. 1945 Trout of Travancore. J. Bombay Nat. Hist. Soc. 45 (3 & 4), pp. 352–373 and pp. 542–547.
MacCrimmon H. R. 1971 World distribution of rainbow trout (Salmo gairdneri). J. Fish. Res. 28, 663–704.
McKinney T., Speas D. W., Rogers R. S. and Persons W. R. 2001 Rainbow trout in a regulated river below Glen Canyon Dam, Arizona, following increased minimum flows and reduced discharge variability. N. Am. J. Fish. Manag. 21, 216–222.
Mitchell F. J. 1918 How trout were introduced into Kashmir. J. Bombay Nat. Hist. Soc. 26, 295–299.
Narum S. R., Contor C., Talbot A. and Powell M. S. 2004 Genetic divergence of sympatric resident and anadromous forms of Oncorhynchus mykiss in the Walla Walla River, USA. J. Fish Biol. 65, 471–488.
Nei M. 1978 Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89, 583–590.
Article CAS PubMed PubMed Central Google Scholar
Neville H. M., Dunham J. B. and Peacock M. M. 2006 Landscape attributes and life history variability shape genetic structure of trout populations in a stream network. Landsc. Ecol. 21, 901–916.
Nikbakht G., Esmailnejad A. and Barjesteh N. 2013 LEI0258 microsatellite variability in Khorasan, Marandi, and Arian chickens. Biochem. Genet. 51, 341–349.
Article CAS PubMed Google Scholar
Petit-Marty N. P., Min L., Tan I. Z., Chung A., Terrasa B., Guijarro B. et al. 2022 Declining population sizes and loss of genetic diversity in commercial fishes: a simple method for a first diagnostic. Front. Mar. Sci. 9, 872537.
Pilgrim B. L., Perry R. C., Keefe D. G., Perry E. A. and Dawn Marshall H. 2012 Microsatellite variation and genetic structure of brook trout (Salvelinus fontinalis) populations in Labrador and neighboring Atlantic Canada: evidence for ongoing gene flow and dual routes of post-Wisconsinan colonization. Ecol. Evol. 2, 885–898.
Article PubMed PubMed Central Google Scholar
Piry S., Luikart G. and Cornuet J. M. 1999 Computer note. BOTTLENECK: a computer program for detecting recent reductions in the effective size using allele frequency data. J. Hered. 90, 502–503.
Pritchard J. K., Stephens M. and Donnelly P. 2000 Inference of population structure using multilocus genotype data. Genetics 155, 945–959.
Article CAS PubMed PubMed Central Google Scholar
Pujolar J. M., Lucarda A. N., Simonato M. and Patarnello T. 2011 Restricted gene flow at the micro-and macro-geographical scale in marble trout based on mtDNA and microsatellite polymorphism. Front. Zool. 8, 1–10.
Queller D. C., Strassmann J. E. and Hughes C. R. 1993 Microsatellites and kinship. Trends Ecol. Evol. 8, 285–288.
Article CAS PubMed Google Scholar
Rexroad Iii C. E., Coleman R. L., Gustafson A. L., Hershberger W. K. and Killefer J. 2002 Development of rainbow trout microsatellite markers from repeat enriched libraries. J. Mar. Biotechnol. 4, 12–16.
Sharma R. K. and Bhat R. A. 2015 Length-weight relationship, condition factor of rainbow trout (Oncorhynchus mykiss) from Kashmir waters. Ann. Biol. Res. 6, 25–29.
Russell D. W. and Sambrook J. 2001 Molecular cloning: a laboratory manual, vol. 1, pp. 112. Cold Spring Harbor, NY.
Sanetra M., Henning F., Fukamachi S. and Meyer A. 2009 A microsatellite-based genetic linkage map of the cichlid fish, Astatotilapia burtoni (Teleostei): a comparison of genomic architectures among rapidly speciating cichlids. Genetics 182, 387–397.
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